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PLM4_90_b1_sep16_scaffold_2568

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_2568_1
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

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comp(3..575)
DNA (573bp) protein (191aa)
Non-canonical purine NTP pyrophosphatase bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
Tax=RBG_13_Nitrospirae_39_12_curated
PLM4_90_b1_sep16_scaffold_2568_2
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

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960..1406
DNA (447bp) protein (149aa)
RDD family, putative bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
Tax=RBG_13_Nitrospirae_39_12_curated
PLM4_90_b1_sep16_scaffold_2568_3
RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated, Nitrospirae, Bacteria

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1396..2421
DNA (1026bp) protein (342aa)
Rod shape-determining protein MreB bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
rod shape-determining protein MreB
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated
PLM4_90_b1_sep16_scaffold_2568_4
CG_Nitrosp_02, Nitrospirae, Bacteria

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2424..3203
DNA (780bp) protein (260aa)
Rod shape-determining protein MreC bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
mreC; rod shape-determining protein MreC
Tax=CG_Nitrosp_02
PLM4_90_b1_sep16_scaffold_2568_5
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

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3200..3652
DNA (453bp) protein (151aa)
Rod shape-determining protein MreD bin=GWC2_CP_Nitrospirae-rel_42_7 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
putative cell shape-determining protein MreD
Tax=RBG_13_Nitrospirae_39_12_curated
PLM4_90_b1_sep16_scaffold_2568_6
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

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3676..5460
DNA (1785bp) protein (595aa)
Penicillin-binding protein 2 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
penicillin-binding protein 2
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
PLM4_90_b1_sep16_scaffold_2568_7
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

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5464..5652
DNA (189bp) protein (63aa)
Rod shape-determining protein RodA bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
mrdB; rod shape-determining protein RodA
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
PLM4_90_b1_sep16_scaffold_2568_8
RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated, Nitrospirae, Bacteria

Not on your lists

5652..5873
DNA (222bp) protein (74aa)
Rod shape-determining protein RodA bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
mrdB; rod shape-determining protein RodA
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated
Displaying 8 items

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