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PLM4_90_b1_sep16_scaffold_469

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_469_1
R_OD1_Falkowbacteria_45_15, Falkowbacteria, Parcubacteria, Bacteria

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1..588
DNA (588bp) protein (196aa)
hypothetical protein; K06872 uncharacterized protein bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_45_15_curated
PLM4_90_b1_sep16_scaffold_469_2
RIFOXYB1_FULL_OD1_Wolfebacteria_54_12_curated, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

741..1637
DNA (897bp) protein (299aa)
lysS; lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
lysS; lysyl-tRNA synthetase
Tax=RIFOXYB1_FULL_OD1_Wolfebacteria_54_12_curated
PLM4_90_b1_sep16_scaffold_469_3
GWA2_OD1_ACD81_47_9, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

1607..2197
DNA (591bp) protein (197aa)
lysS; lysyl-tRNA synthetase; K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Lysyl-tRNA synthetase {ECO:0000313|EMBL:KKU90558.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWA2_47_9b.;"
lysyl-tRNA synthetase
PLM4_90_b1_sep16_scaffold_469_4
R_RIF_OD1_07_48_16, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

2237..2563
DNA (327bp) protein (109aa)
Uncharacterized conserved protein bin=GWA1_Kazan_50_15 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_07_48_16_curated
PLM4_90_b1_sep16_scaffold_469_5
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

2603..4369
DNA (1767bp) protein (589aa)
gmc:GY4MC1_1083 DNA primase; K02316 DNA primase [EC:2.7.7.-] bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
dnaG; DNA primase (EC:2.7.7.-)
Tax=CG_Wolfe_01
PLM4_90_b1_sep16_scaffold_469_6
unknown

Not on your lists

4811..4966
DNA (156bp) protein (52aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_469_7
GWA1_OD1_47_6, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

5017..5979
DNA (963bp) protein (321aa)
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RNA polymerase sigma factor {ECO:0000313|EMBL:KKU76269.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWA1_47_6.;"
RpoD subfamily RNA polymerase sigma-70 subunit
PLM4_90_b1_sep16_scaffold_469_8
GWE2_OD1_39_37, Parcubacteria, Bacteria

Not on your lists


6171..7991
DNA (1821bp) protein (607aa)
Uncharacterized protein (Fragment) Tax=uncultured bacterium RepID=K1ZCI7_9BACT
Alanine-tRNA ligase {ECO:0000313|EMBL:KKR19140.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_39_37.;"
Alanine-tRNA ligase
PLM4_90_b1_sep16_scaffold_469_9
Parcubacteria bacterium RAAC4_OD1_1, Parcubacteria, Bacteria

Not on your lists

8252..8659
DNA (408bp) protein (136aa)
Uncharacterized protein Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PW62_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ETB63854.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium RAAC4_OD1_1.;"
PLM4_90_b1_sep16_scaffold_469_10
RHI_OD1_Moranbacteria_40_10, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

9058..9336
DNA (279bp) protein (93aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI00036E4B74
Tax=RIFCSPHIGHO2_12_FULL_OD1_Moranbacteria_40_10_curated
PLM4_90_b1_sep16_scaffold_469_11
RHI_OD1_Moranbacteria_40_10, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

9340..9762
DNA (423bp) protein (141aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI00037AC1EF
death-on-curing family protein
Tax=RIFCSPHIGHO2_12_FULL_OD1_Moranbacteria_40_10_curated
PLM4_90_b1_sep16_scaffold_469_12

Not on your lists

9835..10911
DNA (1077bp) protein (359aa)
TspO and MBR like protein {ECO:0000313|EMBL:KKR46482.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_13.;"
TspO and MBR like protein bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
hypothetical protein
PLM4_90_b1_sep16_scaffold_469_13
R_RIF_OD1_10_35_19, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

10963..12696
DNA (1734bp) protein (578aa)
AAA ATPase bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
exonuclease V subunit alpha
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_10_35_19_curated
PLM4_90_b1_sep16_scaffold_469_14
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

comp(13097..14104)
DNA (1008bp) protein (336aa)
Putative uncharacterized protein bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
permease
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
PLM4_90_b1_sep16_scaffold_469_15
RBG_13_RIF_OD1_07_42_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(14176..14379)
DNA (204bp) protein (68aa)
hypothetical protein bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
hypothetical protein
Tax=RBG_13_RIF_OD1_07_42_11_curated
PLM4_90_b1_sep16_scaffold_469_16
GWA1_OD1_36_12, Parcubacteria, Bacteria

Not on your lists

15037..15297
DNA (261bp) protein (87aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000365E383
Uncharacterized protein {ECO:0000313|EMBL:KKP93468.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_36_12.;"
SWIB/MDM2 domain-containing protein
PLM4_90_b1_sep16_scaffold_469_17
R_RIF_OD1_09_47_33b, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(15459..15827)
DNA (369bp) protein (123aa)
hypothetical protein
hypothetical protein bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_47_33b_curated
PLM4_90_b1_sep16_scaffold_469_18
unknown

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comp(15779..15946)
DNA (168bp) protein (56aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_469_19
RIFOXYD1_FULL_RIF_OD1_06_32_13_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

16035..16352
DNA (318bp) protein (106aa)
Tax=RIFOXYD1_FULL_RIF_OD1_06_32_13_curated
PLM4_90_b1_sep16_scaffold_469_20
unknown

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comp(16464..17435)
DNA (972bp) protein (324aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_469_21
unknown

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comp(17533..18591)
DNA (1059bp) protein (353aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_469_22
unknown

Not on your lists

18733..18843
DNA (111bp) protein (37aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_469_23
GWA1_WWE3_41_8, WWE3, Bacteria

Not on your lists

comp(18852..20138)
DNA (1287bp) protein (429aa)
processing peptidase (EC:3.4.24.64) bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
Peptidase M16 domain protein {ECO:0000313|EMBL:KKS22656.1}; species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWA1_41_8.;"
hypothetical protein
PLM4_90_b1_sep16_scaffold_469_24
unknown

Not on your lists

comp(20213..20326)
DNA (114bp) protein (38aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_469_25
R_RIF_OD1_06_42_22, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(20772..21128)
DNA (357bp) protein (119aa)
Putative HNH endonuclease 2 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_42_22_curated
PLM4_90_b1_sep16_scaffold_469_26
RIFOXYC2_FULL_OD1_Campbellbacteria_35_25_curated, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists

21330..21890
DNA (561bp) protein (187aa)
Tax=RIFOXYC2_FULL_OD1_Campbellbacteria_35_25_curated
PLM4_90_b1_sep16_scaffold_469_27
RBG_13_OD1_Wolfebacteria_41_7_curated, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

21994..22422
DNA (429bp) protein (143aa)
hemerythrin-like metal-binding protein; K07216 hemerythrin bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
diguanylate cyclase
Tax=RBG_13_OD1_Wolfebacteria_41_7_curated
PLM4_90_b1_sep16_scaffold_469_28
unknown

Not on your lists

22403..22501
DNA (99bp) protein (33aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_469_29
CG_CPR03_03, CG_CPR03, Bacteria

Not on your lists

22602..22859
DNA (258bp) protein (86aa)
GIY-YIG nuclease superfamily protein Tax=Cecembia lonarensis LW9 RepID=K1LZY8_9BACT
putative endonuclease containing a URI domain
Tax=CG_CPR03_03
PLM4_90_b1_sep16_scaffold_469_30

Not on your lists

23132..24436
DNA (1305bp) protein (435aa)
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:KKW07672.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_49_16.;"
mes:Meso_1423 DEAD/DEAH box helicase-like bin=ACD8 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
ATP-dependent RNA helicase RhlE
Displaying items 1-30 of 41 in total

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