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PLM4_90_b1_sep16_scaffold_85

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_85_1
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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1..951
-----------------
DNA (951bp)
protein (317aa)
2-amino-3-ketobutyrate CoA ligase (EC:2.3.1.29)
7-keto-8-aminopelargonate synthetase-like enzyme Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T811_9EURY
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_85_2
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(996..1223)
-----------------
DNA (228bp)
protein (76aa)
Aldehyde:ferredoxin oxidoreductase (Fragment) Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T7W0_9ARCH
aldehyde:ferredoxin oxidoreductase
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_85_3
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(1208..2869)
-----------------
DNA (1662bp)
protein (554aa)
aldehyde ferredoxin oxidoreductase (EC:1.2.7.5)
Aldehyde ferredoxin oxidoreductase Tax=Thermofilum pendens (strain Hrk 5) RepID=A1S030_THEPD
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_85_4

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3481..4131
-----------------
DNA (651bp)
protein (217aa)
Putative membrane-associated protein Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TSW7_9ARCH
Marine sediment metagenome DNA, contig: S06H3_C04631 {ECO:0000313|EMBL:GAI05252.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM4_90_b1_sep16_scaffold_85_5
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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4128..5417
-----------------
DNA (1290bp)
protein (430aa)
PHP domain-containing protein bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
DNA and RNA helicase
Tax=RBG_16_Bathyarchaeota_48_13_curated
PLM4_90_b1_sep16_scaffold_85_6
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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5510..5848
-----------------
DNA (339bp)
protein (113aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_85_7
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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6018..6953
-----------------
DNA (936bp)
protein (312aa)
hypothetical protein Tax=crenarchaeote SCGC AAA261-N13 RepID=UPI00037FF3A0
4Fe-4S ferredoxin
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_85_8
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(6967..8184)
-----------------
DNA (1218bp)
protein (406aa)
Putative uncharacterized protein Tax=Thermincola potens (strain JR) RepID=D5X9C3_THEPJ
hypothetical protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_85_9
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(8181..8807)
-----------------
DNA (627bp)
protein (209aa)
Glycosyl transferase group 1 Tax=Clostridium sp. CAG:269 RepID=R7ISP7_9CLOT
group 1 glycosyl transferase
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_85_10
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(8817..9065)
-----------------
DNA (249bp)
protein (83aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_85_11
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(9136..10683)
-----------------
DNA (1548bp)
protein (516aa)
Alpha-amylase Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WR37_METH6
Alpha-amylase
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_85_12
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(10783..12012)
-----------------
DNA (1230bp)
protein (410aa)
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RY95_THEPD
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_85_13
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(12086..13105)
-----------------
DNA (1020bp)
protein (340aa)
gap; glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.-)
hypothetical protein Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI000379C35B
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_85_14
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(13150..14538)
-----------------
DNA (1389bp)
protein (463aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=Methanotorris formicicus Mc-S-70 RepID=H1KZ95_9EURY
NADH oxidase
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_85_15
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(14549..14959)
-----------------
DNA (411bp)
protein (137aa)
gcvH; glycine cleavage system H-protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
gcvH; Glycine cleavage system H protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_85_16
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(15043..16119)
-----------------
DNA (1077bp)
protein (359aa)
myo-inositol-1-phosphate synthase (EC:5.5.1.4)
Myo-inositol-1-phosphate synthase; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_85_17
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

16252..16620
-----------------
DNA (369bp)
protein (123aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_85_18
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

16636..17067
-----------------
DNA (432bp)
protein (144aa)
Riboflavin kinase Tax=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) RepID=RIFK_PYRAR
riboflavin kinase
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_85_19
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(17057..18577)
-----------------
DNA (1521bp)
protein (507aa)
Acetyl-CoA synthetase (ADP-forming) alpha chain (EC:6.2.1.13)
CoA-binding protein Tax=Thermofilum sp. 1910b RepID=S5ZV20_9CREN
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_85_20
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(18574..19416)
-----------------
DNA (843bp)
protein (281aa)
Putative uncharacterized protein Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BF57_METIK
hypothetical protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_85_21
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(19453..20151)
-----------------
DNA (699bp)
protein (233aa)
thyX; putative thymidylate synthase ThyX (EC:2.1.1.148)
Thymidylate synthase ThyX Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GNZ1_SELRL
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_85_22
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(20258..21322)
-----------------
DNA (1065bp)
protein (355aa)
heat shock protein; K03799 heat shock protein HtpX [EC:3.4.24.-] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
heat shock protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_85_23
unknown

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21572..22024
-----------------
DNA (453bp)
protein (151aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_85_24
unknown

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comp(22285..22785)
-----------------
DNA (501bp)
protein (167aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_85_25
unknown

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comp(22827..23573)
-----------------
DNA (747bp)
protein (249aa)

This feature has no annotations

Displaying 25 items

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