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PLM4_90_b1_sep16_scaffold_91

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_91_1

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85..1182
-----------------
DNA (1098bp)
protein (366aa)
aminopeptidase protein (EC:3.4.11.-)
Aminopeptidase Tax=Caloramator australicus RC3 RepID=I7LID1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KKM24855.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM4_90_b1_sep16_scaffold_91_2
RBG_13_WOR_3_43_14_curated, WOR-3, Bacteria

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1252..2550
-----------------
DNA (1299bp)
protein (433aa)
Major facilitator superfamily MFS_1 bin=GWE1_Spirochaete_60_18 species=Methylobacterium sp. GXF4 genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes
major facilitator superfamily protein
Tax=RBG_13_WOR_3_43_14_curated
PLM4_90_b1_sep16_scaffold_91_3
RBG_16_Archaea_50_20_curated, Archaea

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2604..3092
-----------------
DNA (489bp)
protein (163aa)
hypothetical protein; K09129 hypothetical protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RBG_16_Archaea_50_20_curated
PLM4_90_b1_sep16_scaffold_91_4
S_OP1_64_32, KB1, Bacteria

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3610..4146
-----------------
DNA (537bp)
protein (179aa)
Nitroreductase Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQ32_METZD
nitroreductase
Tax=S_OP1_64_32
PLM4_90_b1_sep16_scaffold_91_5
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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4261..4776
-----------------
DNA (516bp)
protein (172aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_91_6
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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4893..8444
-----------------
DNA (3552bp)
protein (1184aa)
Chromosome segregation ATPase Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TB52_9ARCH
chromosome segregation ATPase
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_91_7
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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8444..9145
-----------------
DNA (702bp)
protein (234aa)
Condensin subunit ScpA Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TVH0_9ARCH
segregation and condensation protein A
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_91_8
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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9117..9725
-----------------
DNA (609bp)
protein (203aa)
Putative transcriptional regulator Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U4W2_9ARCH
hypothetical protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_91_9
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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9790..10185
-----------------
DNA (396bp)
protein (132aa)
30S ribosomal protein S8e Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T4T0_9ARCH
30S ribosomal protein S8e
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_91_10
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(10182..10490)
-----------------
DNA (309bp)
protein (103aa)
Signal recognition particle 19 kDa protein Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=SRP19_METKA
SEC65; signal recognition particle protein Srp19
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_91_11
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(10506..12257)
-----------------
DNA (1752bp)
protein (584aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase Tax=Pyrococcus furiosus RepID=SYE_PYRFU
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_91_12
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(12270..13340)
-----------------
DNA (1071bp)
protein (357aa)
geranylgeranyl diphosphate synthase, type I (EC:2.5.1.1)
polyprenyl synthetase; K13787 geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_91_13
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(13351..14445)
-----------------
DNA (1095bp)
protein (365aa)
Isopentenyl-diphosphate delta-isomerase, FMN-dependent (EC:5.3.3.2)
Isopentenyl-diphosphate delta-isomerase Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=IDI2_METBF
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_91_14
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(14450..15250)
-----------------
DNA (801bp)
protein (267aa)
Isopentenyl phosphate kinase Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TBH6_9EURY
isopentenyl diphosphate kinase
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_91_15
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(15237..16220)
-----------------
DNA (984bp)
protein (328aa)
mevalonate kinase (EC:2.7.1.36)
Mevalonate kinase Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=KIME_PYRHO
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_91_16
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(16230..17081)
-----------------
DNA (852bp)
protein (284aa)
MEMO1 family protein MK0963 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Y963_METKA
dioxygenase
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_91_17
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(17086..17877)
-----------------
DNA (792bp)
protein (264aa)
30S ribosomal protein S2 Tax=Halobacterium sp. DL1 RepID=G4IBJ0_9EURY
30S ribosomal protein S2
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_91_18
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(17883..19145)
-----------------
DNA (1263bp)
protein (421aa)
enolase (EC:4.2.1.11)
Enolase Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZF8_METFV
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_91_19
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(19410..19820)
-----------------
DNA (411bp)
protein (137aa)
30S ribosomal protein S9 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZF5_METFV
30S ribosomal protein S9
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_91_20
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(19823..20266)
-----------------
DNA (444bp)
protein (148aa)
50S ribosomal protein L13 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HLI6_ACIS0
ribosomal protein L13, archaeal/eukaryotic
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_91_21
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(20272..20508)
-----------------
DNA (237bp)
protein (79aa)
50S ribosomal protein L18e Tax=Methanotorris formicicus Mc-S-70 RepID=H1KXZ6_9EURY
50S ribosomal protein L18
Tax=RBG_13_Bathyarchaeota_46_16b_curated
Displaying 21 items

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