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PLM4_90_b1_sep16_scaffold_92

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_92_1
Thermoplasmatales archaeon E-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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1..630
-----------------
DNA (630bp)
protein (210aa)
Uncharacterized protein Tax=Thermoplasmatales archaeon E-plasma RepID=T0LEX5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB66502.1}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon E-plasma.;"
ABC transporter
PLM4_90_b1_sep16_scaffold_92_2
unknown

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710..940
-----------------
DNA (231bp)
protein (77aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_92_trna_2
unknown

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comp(946..1019)
-----------------
DNA (74bp)
transferRNA Thr
PLM4_90_b1_sep16_scaffold_92_trna_1
unknown

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1136..1220
-----------------
DNA (85bp)
transferRNA Leu
PLM4_90_b1_sep16_scaffold_92_3
unknown

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comp(1290..2798)
-----------------
DNA (1509bp)
protein (503aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_92_4
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(2872..3378)
-----------------
DNA (507bp)
protein (169aa)
ChrB protein bin=GWC2_Methylomirabilis_70_24 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_92_5
unknown

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3621..4211
-----------------
DNA (591bp)
protein (197aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_92_6
Thermofilum pendens, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(4055..5059)
-----------------
DNA (1005bp)
protein (335aa)
asparagine synthetase A (EC:6.1.1.22)
Aspartate-ammonia ligase {ECO:0000313|EMBL:ABL79228.1}; EC=6.3.1.1 {ECO:0000313|EMBL:ABL79228.1};; species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum pendens (strain Hrk 5).;"
hypothetical protein Tax=candidate division YNPFFA RepID=UPI0003678963
PLM4_90_b1_sep16_scaffold_92_7
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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5060..5527
-----------------
DNA (468bp)
protein (156aa)
hypothetical protein Tax=unclassified Crenarchaeota RepID=UPI00037E5D20
AsnC family transcriptional regulator
Tax=RBG_13_Bathyarchaeota_52_12_curated
PLM4_90_b1_sep16_scaffold_92_8
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(5597..5998)
-----------------
DNA (402bp)
protein (134aa)
Putative uncharacterized protein Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=Q2NGX7_METST
hypothetical protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_92_9
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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6082..7269
-----------------
DNA (1188bp)
protein (396aa)
Flavodoxin Tax=Thermotoga sp. EMP RepID=J9HEB2_9THEM
flavodoxin
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_92_10
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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7336..8559
-----------------
DNA (1224bp)
protein (408aa)
Sensory box protein Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YBK6_DICT6
sensory box protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_92_11
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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8740..9468
-----------------
DNA (729bp)
protein (243aa)
proteasome subunit alpha (EC:3.4.25.1)
Proteasome subunit alpha Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RXQ9_THEPD
Tax=RBG_16_Bathyarchaeota_48_13_curated
PLM4_90_b1_sep16_scaffold_92_12
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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9476..10165
-----------------
DNA (690bp)
protein (230aa)
Putative uncharacterized protein family UPF0023 Tax=uncultured marine crenarchaeote HF4000_APKG5E24 RepID=B3T8C4_9ARCH
ribosome maturation protein SDO1
Tax=RBG_13_Bathyarchaeota_38_9_curated
PLM4_90_b1_sep16_scaffold_92_13
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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10197..10907
-----------------
DNA (711bp)
protein (237aa)
Exosome complex component Rrp4 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BKB9_HYPBU
exosome complex RNA-binding protein Rrp4
Tax=RBG_16_Bathyarchaeota_48_13_curated
PLM4_90_b1_sep16_scaffold_92_14
RBG_16_Archaea_50_20_curated, Archaea

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10900..11649
-----------------
DNA (750bp)
protein (250aa)
Exosome complex component Rrp41 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AH18_PYRYC
exosome complex exonuclease Rrp41
Tax=RBG_16_Archaea_50_20_curated
PLM4_90_b1_sep16_scaffold_92_15
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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11649..12440
-----------------
DNA (792bp)
protein (264aa)
Exosome complex component Rrp42 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AH19_PYRYC
exosome complex RNA-binding protein Rrp42
Tax=RBG_16_Bathyarchaeota_48_13_curated
PLM4_90_b1_sep16_scaffold_92_16
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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12466..12768
-----------------
DNA (303bp)
protein (101aa)
50S ribosomal protein L37Ae Tax=Methanothermobacter thermautotrophicus RepID=RL37A_METTH
rpl37ae; 50S ribosomal protein L37
Tax=RBG_16_Bathyarchaeota_48_13_curated
PLM4_90_b1_sep16_scaffold_92_17
unknown

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13308..14003
-----------------
DNA (696bp)
protein (232aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_92_18
unknown

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13945..14232
-----------------
DNA (288bp)
protein (96aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_92_19
unknown

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14299..14961
-----------------
DNA (663bp)
protein (221aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_92_20
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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15742..16737
-----------------
DNA (996bp)
protein (332aa)
Predicted phosphoesterase, DHH family Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BKC6_HYPBU
DHH family phosphoesterase
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_92_21
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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16794..17645
-----------------
DNA (852bp)
protein (284aa)
Cobalt/nickel ABC transporter ATP-binding protein Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8Z3_9ARCH
cobalt/nickel ABC transporter ATP-binding protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_92_22
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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17642..18466
-----------------
DNA (825bp)
protein (275aa)
ABC transporter related Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RY35_THEPD
ABC transporter-like protein
Tax=RBG_16_Bathyarchaeota_48_13_curated
PLM4_90_b1_sep16_scaffold_92_23
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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18463..19290
-----------------
DNA (828bp)
protein (276aa)
Cobalt/nickel ABC transporter permease Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N912_9ARCH
cobalt/nickel ABC transporter permease
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_92_24
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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19714..21381
-----------------
DNA (1668bp)
protein (556aa)
Type IV secretory pathway component Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KJG4_9ARCH
type II secretion system protein E
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_92_25
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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21378..22388
-----------------
DNA (1011bp)
protein (337aa)
type II secretion system protein; K07333 archaeal flagellar protein FlaJ bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
type II secretion system protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_92_26
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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22382..23209
-----------------
DNA (828bp)
protein (276aa)
Flp pilus assembly protein TadC Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KWX5_METHD
Flp pilus assembly protein TadC
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_92_27
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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23218..23631
-----------------
DNA (414bp)
protein (138aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_92_28
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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23606..24517
-----------------
DNA (912bp)
protein (304aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
Displaying items 1-30 of 35 in total

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