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PLM4_90_b1_sep16_scaffold_451

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_451_1
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(2..547)
-----------------
DNA (546bp)
protein (182aa)
Glycosyl transferase Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HKT8_ACIS0
glycosyl transferase
Tax=RBG_13_Bathyarchaeota_38_9_curated
PLM4_90_b1_sep16_scaffold_451_2
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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941..1861
-----------------
DNA (921bp)
protein (307aa)
Radical SAM domain protein Tax=Methanoplanus limicola DSM 2279 RepID=H1Z409_9EURY
radical SAM domain-containing protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_451_3
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(2220..2819)
-----------------
DNA (600bp)
protein (200aa)
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5F9_9ARCH
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_451_4
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(3106..3612)
-----------------
DNA (507bp)
protein (169aa)
Putative integral membrane protein DUF106 Tax=uncultured marine microorganism HF4000_ANIW141A21 RepID=B3T580_9ZZZZ
hypothetical protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_451_5
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(3691..5145)
-----------------
DNA (1455bp)
protein (485aa)
Protein translocase subunit SecY Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U2G8_9ARCH
preprotein translocase subunit SecY
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_451_6

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comp(5156..5632)
-----------------
DNA (477bp)
protein (159aa)
50S ribosomal protein L15P Tax=uncultured Acidilobus sp. JCHS RepID=V4JGZ8_9CREN
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rpl15p; 50S ribosomal protein L15
PLM4_90_b1_sep16_scaffold_451_7
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(5637..6092)
-----------------
DNA (456bp)
protein (152aa)
Heat shock protein Hsp20 Tax=Thermogladius cellulolyticus (strain 1633) RepID=I3TEF4_THEC1
small heat shock protein (hsp20-1)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_451_8
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists


comp(6184..6672)
-----------------
DNA (489bp)
protein (163aa)
50S ribosomal protein L30P Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T8Z5_9ARCH
50S ribosomal protein L7e
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_451_9
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists


comp(6673..7338)
-----------------
DNA (666bp)
protein (222aa)
30S ribosomal protein S5 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T8C7_9ARCH
30S ribosomal protein S5
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_451_10

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comp(7341..7940)
-----------------
DNA (600bp)
protein (200aa)
50S ribosomal protein L18P Tax=Thermococcus sp. CL1 RepID=I3ZSY1_9EURY
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L18P
PLM4_90_b1_sep16_scaffold_451_11
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(7940..8395)
-----------------
DNA (456bp)
protein (152aa)
50S ribosomal protein L19e Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U2H1_9ARCH
rpl19e; 50S ribosomal protein L19
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_451_12
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(8392..8940)
-----------------
DNA (549bp)
protein (183aa)
50S ribosomal protein L32e Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TT73_9ARCH
50S ribosomal protein L32e
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_451_13

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comp(8943..9485)
-----------------
DNA (543bp)
protein (181aa)
50S ribosomal protein L6 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0ECG1_PYRF1
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
50S ribosomal protein L6P
PLM4_90_b1_sep16_scaffold_451_14

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comp(9499..9882)
-----------------
DNA (384bp)
protein (128aa)
30S ribosomal protein S8 Tax=uncultured marine crenarchaeote E37-7F RepID=G9BAP1_9CREN
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps8p; 30S ribosomal protein S8
PLM4_90_b1_sep16_scaffold_451_15
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists


comp(10078..10572)
-----------------
DNA (495bp)
protein (165aa)
50S ribosomal protein L5 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BMD2_HYPBU
rpl5p; 50S ribosomal protein L5P
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_451_16
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(10616..11374)
-----------------
DNA (759bp)
protein (253aa)
30S ribosomal protein S4e Tax=Staphylothermus hellenicus (strain DSM 12710 / JCM 10830 / BK20S6-10-b1 / P8) RepID=D7D9S4_STAHD
30S ribosomal protein S4E, central domain-containing protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_451_17
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists


comp(11377..12117)
-----------------
DNA (741bp)
protein (247aa)
50S ribosomal protein L24P Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LHB9_THEBM
50S ribosomal protein L26e (L24p)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_451_18
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists


comp(12131..12571)
-----------------
DNA (441bp)
protein (147aa)
50S ribosomal protein L14 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3TB38_ACIB4
50S ribosomal protein L14P
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_451_19

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comp(12573..12890)
-----------------
DNA (318bp)
protein (106aa)
30S ribosomal protein S17P Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RS17_METKA
30S ribosomal protein S17, small subunit ribosomal protein S17 {ECO:0000313|EMBL:AJS13271.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps17p; 30S ribosomal protein S17
PLM4_90_b1_sep16_scaffold_451_20
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(12891..13172)
-----------------
DNA (282bp)
protein (94aa)
Ribonuclease P protein component 1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D7K9_METSW
ribonuclease P protein component 1
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_451_21
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists


comp(13169..13495)
-----------------
DNA (327bp)
protein (109aa)
50S ribosomal protein L29P Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TT83_9ARCH
rpl29p; 50S ribosomal protein L29
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_451_22

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comp(13495..14256)
-----------------
DNA (762bp)
protein (254aa)
30S ribosomal protein S3 Tax=Methanobacterium sp. MB1 RepID=U6ECC1_9EURY
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps3; 30S ribosomal protein S3
PLM4_90_b1_sep16_scaffold_451_23
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists


comp(14256..14705)
-----------------
DNA (450bp)
protein (150aa)
50S ribosomal protein L22P Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZC3_METFV
50S ribosomal protein L22
Tax=RBG_13_Bathyarchaeota_46_16b_curated
Displaying 23 items

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