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PLM4_90_b1_sep16_scaffold_2479

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_2479_1
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(3..440)
-----------------
DNA (438bp)
protein (146aa)
formylmethanofuran/tetrahydromethanopterin N-formyltransferase (EC:2.3.1.101)
Formylmethanofuran--tetrahydromethanopterin formyltransferase Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VSI1_METIM
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_2479_2

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811..1563
-----------------
DNA (753bp)
protein (251aa)
Zinc transporter {ECO:0000313|EMBL:AHM02056.1}; species="Archaea; Crenarchaeota; miscellaneous Crenarchaeota group; environmental samples.;" source="uncultured miscellaneous Crenarchaeota group.;"
zinc/iron permease bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
hypothetical protein
PLM4_90_b1_sep16_scaffold_2479_3
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1979..2251
-----------------
DNA (273bp)
protein (91aa)
Dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoamide dehydrogenase Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TQ99_METAC
Dihydrolipoamide dehydrogenase {ECO:0000313|EMBL:KGK98941.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides methylutens.;"
PLM4_90_b1_sep16_scaffold_2479_4

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2190..2603
-----------------
DNA (414bp)
protein (138aa)
Dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoamide dehydrogenase Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q468U2_METBF
Marine sediment metagenome DNA, contig: S12H4_S03387 {ECO:0000313|EMBL:GAI91262.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM4_90_b1_sep16_scaffold_2479_5
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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2813..3412
-----------------
DNA (600bp)
protein (200aa)
Iron (Metal) dependent repressor, DtxR family Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D524_METSW
DtxR family iron (metal) dependent repressor
Tax=RBG_16_Bathyarchaeota_48_13_curated
PLM4_90_b1_sep16_scaffold_2479_6
Methanobacterium sp. Maddingley MBC34, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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3416..5317
-----------------
DNA (1902bp)
protein (634aa)
Ferrous iron transporter FeoB Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6SXR6_9EURY
Ferrous iron transporter FeoB {ECO:0000313|EMBL:EKQ51053.1}; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium sp. Maddingley MBC34.;"
feoB1; ferrous iron transport protein B FeoB1
PLM4_90_b1_sep16_scaffold_2479_7
unknown

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5576..6049
-----------------
DNA (474bp)
protein (158aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_2479_8
RBG_13_Chloroflexi_54_8_curated, Chloroflexi, Bacteria

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comp(6199..7647)
-----------------
DNA (1449bp)
protein (483aa)
kat; Catalase (EC:1.11.1.6)
Catalase Tax=Methanoplanus limicola DSM 2279 RepID=H1Z408_9EURY
Tax=RBG_13_Chloroflexi_54_8_curated
PLM4_90_b1_sep16_scaffold_2479_9
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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7741..8181
-----------------
DNA (441bp)
protein (147aa)
Ferric uptake regulation protein Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TS35_METAC
fur; ferric uptake regulation protein
Tax=RBG_16_Bathyarchaeota_48_13_curated
PLM4_90_b1_sep16_scaffold_2479_10
unknown

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8370..9080
-----------------
DNA (711bp)
protein (237aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_2479_11
unknown

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9073..9777
-----------------
DNA (705bp)
protein (235aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_2479_trna_1
unknown

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comp(9844..9917)
-----------------
DNA (74bp)
transferRNA Phe
PLM4_90_b1_sep16_scaffold_2479_12
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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10340..10609
-----------------
DNA (270bp)
protein (90aa)
Similar to C-terminal part of Q1F5C4_9CHLR Addiction module toxin Tax=Microcystis aeruginosa RepID=I4G2K1_MICAE
putative RelE protein
Tax=RBG_16_Micrarchaeota_49_10_curated
PLM4_90_b1_sep16_scaffold_2479_13
unknown

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comp(10868..11143)
-----------------
DNA (276bp)
protein (92aa)

This feature has no annotations

Displaying 14 items

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