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PLM4_90_b1_sep16_scaffold_3387

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_3387_1
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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1..537
-----------------
DNA (537bp)
protein (179aa)
Pre mRNA splicing protein Tax=Sulfolobus solfataricus RepID=Q97ZH3_SULSO
Pre-mRNA processing ribonucleoprotein, binding domain-containing protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_3387_2
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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503..1246
-----------------
DNA (744bp)
protein (248aa)
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase Tax=Thermoproteus uzoniensis (strain 768-20) RepID=F2L4D2_THEU7
fibrillarin
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_3387_3
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(1339..2001)
-----------------
DNA (663bp)
protein (221aa)
Ribonuclease HII Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5ID87_ACIB4
ribonuclease HII
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_3387_4
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(2044..2610)
-----------------
DNA (567bp)
protein (189aa)
Nucleoside-triphosphatase THEP1 Tax=Thermofilum pendens (strain Hrk 5) RepID=NTPTH_THEPD
putative NTPase
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_3387_5
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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2689..3936
-----------------
DNA (1248bp)
protein (416aa)
N2,N2-dimethylguanosine tRNA methyltransferase Tax=Methanobrevibacter smithii RepID=UPI000378BA76
n(2),n(2)-dimethylguanosine tRNA methyltransferase
Tax=RBG_16_Bathyarchaeota_48_13_curated
PLM4_90_b1_sep16_scaffold_3387_6
Methanocaldococcus infernus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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4032..5045
-----------------
DNA (1014bp)
protein (338aa)
Homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000313|EMBL:ADG12684.1}; EC=1.1.1.3 {ECO:0000313|EMBL:ADG12684.1};; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME).;"
Homoserine dehydrogenase Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VU72_METIM
PLM4_90_b1_sep16_scaffold_3387_7
Pyrolobus fumarii, Pyrolobus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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5190..6905
-----------------
DNA (1716bp)
protein (572aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Pyrodictiaceae; Pyrolobus.;" source="Pyrolobus fumarii (strain DSM 11204 / 1A).;"
Methionine--tRNA ligase Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EE63_PYRF1
methionyl-tRNA synthetase
PLM4_90_b1_sep16_scaffold_3387_8
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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6929..7576
-----------------
DNA (648bp)
protein (216aa)
PHP domain protein Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D7C6_METSW
PHP domain-containing protein
Tax=RBG_16_Bathyarchaeota_48_13_curated
PLM4_90_b1_sep16_scaffold_3387_9
unknown

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comp(7987..8190)
-----------------
DNA (204bp)
protein (68aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_3387_10
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(8329..9309)
-----------------
DNA (981bp)
protein (327aa)
Cell division protein FtsZ Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S4F1_METSF
cell division protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_3387_11
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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9682..10728
-----------------
DNA (1047bp)
protein (349aa)
2-methylthioadenine synthetase Tax=Pyrococcus furiosus RepID=I6V3I9_9EURY
2-methylthioadenine synthetase
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_3387_12
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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10776..11036
-----------------
DNA (261bp)
protein (87aa)
hypothetical protein Tax=candidate division YNPFFA RepID=UPI00037AC348
hypothetical protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_3387_13
unknown

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comp(11160..11486)
-----------------
DNA (327bp)
protein (109aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_3387_14
uncultured crenarchaeote MCG, Crenarchaeota, Archaea

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comp(11546..11716)
-----------------
DNA (171bp)
protein (57aa)
Radical SAM domain protein Tax=uncultured crenarchaeote MCG RepID=B2YI72_9CREN
Radical SAM domain protein {ECO:0000313|EMBL:ACD50076.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote MCG.;"
hypothetical protein
PLM4_90_b1_sep16_scaffold_3387_15
uncultured crenarchaeote MCG, Crenarchaeota, Archaea

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comp(11716..12486)
-----------------
DNA (771bp)
protein (257aa)
Radical SAM domain protein Tax=uncultured crenarchaeote MCG RepID=B2YI72_9CREN
Radical SAM domain protein {ECO:0000313|EMBL:ACD50076.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote MCG.;"
radical SAM additional 4Fe4S-binding domain-containing protein
Displaying 15 items

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