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PLM4_90_b1_sep16_scaffold_1861_5

Organism: PLM4_90_b1_sep16_Bathyarchaeota_47_9

near complete RP 35 / 55 MC: 6 BSCG 19 / 51 MC: 2 ASCG 33 / 38 MC: 4
Location: comp(2732..3148)

Top 3 Functional Annotations

Value Algorithm Source
Putative nickel-responsive regulator Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VSA3_METIM similarity UNIREF
DB: UNIREF100
  • Identity: 35.8
  • Coverage: 137.0
  • Bit_score: 105
  • Evalue 3.90e-20
Marine sediment metagenome DNA, contig: S03H2_S10577 {ECO:0000313|EMBL:GAH69409.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.5
  • Coverage: 128.0
  • Bit_score: 120
  • Evalue 1.20e-24
transcriptional regulator NikR, CopG family similarity KEGG
DB: KEGG
  • Identity: 35.8
  • Coverage: 137.0
  • Bit_score: 105
  • Evalue 1.10e-20

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Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 417
ATGGAACACGGTGCGAAGGTAGCTAGGTTTAGCGTTTCGCTTCCGCCCACGTTGGTAGAGAAGTTCGATAGCGCTTGGAAGGATATGCATTATGATAATCGTTCGAAAGCTGTCCATGACGCGGTCAGGAGTTTCATCAATGAGCACGAGCTGACCAAGAAGACCGCCGGTAGAATGGCAGGAGTAGTTTTGCTTCTTTATTATCTCGACAAGCCGGGGCTTCTTGAGGAGATAGTTCGCACGCAGCATCTGTTTGAGCGTTTGATTTCTTCGACTCTTCATATTCACTTGGAAAAACACAAATGTCTTGAAATAATCGCGGTTGAAGGAAGCGCACGAGAAATCAATAGTCTTGCTGAGATGTTGGCGACCAAGAGAGGCGTGCAGCAGGTAAGAGTGGCCTCAGTAGCACCCTAG
PROTEIN sequence
Length: 139
MEHGAKVARFSVSLPPTLVEKFDSAWKDMHYDNRSKAVHDAVRSFINEHELTKKTAGRMAGVVLLLYYLDKPGLLEEIVRTQHLFERLISSTLHIHLEKHKCLEIIAVEGSAREINSLAEMLATKRGVQQVRVASVAP*