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PLM4_90_b1_sep16_scaffold_1861

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_1861_1
unknown

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3..353
-----------------
DNA (351bp)
protein (117aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_1861_2

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1059..1409
-----------------
DNA (351bp)
protein (117aa)
Putative uncharacterized protein Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=O27487_METTH
Marine sediment metagenome DNA, contig: S01H1_S16386 {ECO:0000313|EMBL:GAG28092.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM4_90_b1_sep16_scaffold_1861_3
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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1451..1693
-----------------
DNA (243bp)
protein (81aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_1861_4
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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1807..2730
-----------------
DNA (924bp)
protein (308aa)
Agmatinase Tax=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) RepID=C3N741_SULIY
agmatinase
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_1861_5

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comp(2732..3148)
-----------------
DNA (417bp)
protein (139aa)
Putative nickel-responsive regulator Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VSA3_METIM
Marine sediment metagenome DNA, contig: S03H2_S10577 {ECO:0000313|EMBL:GAH69409.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transcriptional regulator NikR, CopG family
PLM4_90_b1_sep16_scaffold_1861_6
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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3247..3798
-----------------
DNA (552bp)
protein (184aa)
Tax=RBG_16_Bathyarchaeota_48_13_curated
PLM4_90_b1_sep16_scaffold_1861_7
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(3818..5176)
-----------------
DNA (1359bp)
protein (453aa)
Nol1-nop2-sun family nucleolar protein II Tax=Pyrococcus furiosus RepID=I6TXB7_9EURY
nol1-nop2-sun family nucleolar protein II
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_1861_8
RBG_16_OP11_45_19_curated, Microgenomates, Bacteria

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5396..7948
-----------------
DNA (2553bp)
protein (851aa)
DNA polymerase I (EC:2.7.7.7)
DNA polymerase Tax=uncultured Candidatus Nitrosocaldus sp. RepID=Q1ERA4_9CREN
Tax=RBG_16_OP11_45_19_curated
PLM4_90_b1_sep16_scaffold_1861_9
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(8016..8561)
-----------------
DNA (546bp)
protein (182aa)
Uncharacterized protein Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L641_KORCO
hypothetical protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_1861_10
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(8693..9604)
-----------------
DNA (912bp)
protein (304aa)
Glycosyl transferase family 4 Tax=Acidianus hospitalis (strain W1) RepID=F4B754_ACIHW
glycosyl transferase family protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_1861_11
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(9616..11352)
-----------------
DNA (1737bp)
protein (579aa)
Putative uncharacterized protein Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5Y4_9ARCH
hypothetical protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_1861_12
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(11920..13068)
-----------------
DNA (1149bp)
protein (383aa)
Aminomethyltransferase Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DF31_9FIRM
gcvT; glycine cleavage system aminomethyltransferase T
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_1861_13
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

13423..15495
-----------------
DNA (2073bp)
protein (691aa)
DNA topoisomerase 1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=TOP1_PYRAB
topA; DNA topoisomerase I
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_1861_14
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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15709..16128
-----------------
DNA (420bp)
protein (140aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_1861_15
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(16295..17110)
-----------------
DNA (816bp)
protein (272aa)
DNA repair and recombination protein RadB Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZI9_METFV
DNA repair and recombination protein radb
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_1861_16
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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17192..17845
-----------------
DNA (654bp)
protein (218aa)
ORFZ protein (Fragment) Tax=mine drainage metagenome RepID=T1BFH2_9ZZZZ
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_1861_17
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

17829..19139
-----------------
DNA (1311bp)
protein (437aa)
GTPase or GTP-binding protein K06947 Tax=Vulcanisaeta moutnovskia (strain 768-28) RepID=F0QX25_VULM7
GTPase or GTP-binding protein K06947
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_1861_18
RBG_16_Archaea_50_20_curated, Archaea

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comp(19123..19797)
-----------------
DNA (675bp)
protein (225aa)
DNA-(Apurinic or apyrimidinic site) lyase Tax=Acidianus hospitalis (strain W1) RepID=F4B6Q0_ACIHW
DNA-(apurinic or apyrimidinic site) lyase
Tax=RBG_16_Archaea_50_20_curated
PLM4_90_b1_sep16_scaffold_1861_19
unknown

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19869..20075
-----------------
DNA (207bp)
protein (69aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_1861_20
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

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20072..21418
-----------------
DNA (1347bp)
protein (449aa)
UbiD family decarboxylase Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GVY6_METFV
ubid family decarboxylase
Tax=RBG_16_Bathyarchaeota_57_9_curated
PLM4_90_b1_sep16_scaffold_1861_21
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

Not on your lists

21482..21877
-----------------
DNA (396bp)
protein (132aa)
Putative signal-transduction protein with CBS domains Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B5X6_METTP
signal-transduction protein
Tax=RBG_13_Bathyarchaeota_52_12_curated
PLM4_90_b1_sep16_scaffold_1861_22
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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21867..22886
-----------------
DNA (1020bp)
protein (340aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 /; NS-C).;"
tRNA threonylcarbamoyladenosine biosynthesis protein Tax=Thermococcus litoralis DSM 5473 RepID=H3ZP91_THELI
tRNA threonylcarbamoyladenosine biosynthesis protein
PLM4_90_b1_sep16_scaffold_1861_23
RBG_16_Archaea_50_20_curated, Archaea

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comp(23196..24770)
-----------------
DNA (1575bp)
protein (525aa)
hutU; urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase Tax=Thermobrachium celere DSM 8682 RepID=R7RR70_9CLOT
Tax=RBG_16_Archaea_50_20_curated
PLM4_90_b1_sep16_scaffold_1861_24

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comp(24924..26312)
-----------------
DNA (1389bp)
protein (463aa)
hutI; imidazolonepropionase HutI (EC:3.5.2.7)
Imidazolonepropionase Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LW59_THEPS
Uncharacterized protein {ECO:0000313|EMBL:KKN50947.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Displaying 24 items

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