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PLM4_90_b2_sep16_scaffold_411

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_411_1
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..524
DNA (522bp) protein (174aa)
Isochorismatase hydrolase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8I2_SPHTD
isochorismatase hydrolase
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_411_2
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

745..1968
DNA (1224bp) protein (408aa)
ABC-type branched-chain amino acid transport system, periplasmic component bin=GWA2_Methylomirabilis_73_35 species=Hylemonella gracilis genus=Hylemonella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched-chain amino acid ABC transporter substrate-binding protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_411_3
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2096..2971
DNA (876bp) protein (292aa)
High-affinity branched-chain amino acid transporter permease LivH bin=bin7_NC10_sister species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
High-affinity branched-chain amino acid transporter permease LivH
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b2_sep16_scaffold_411_4
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3087..4037
DNA (951bp) protein (317aa)
High-affinity branched-chain amino acid transport ATP-binding protein braF (Modular protein) Tax=Bradyrhizobium sp. STM 3843 RepID=H0TGD2_9BRAD bin=RBG2 species=Bradyrhizobium sp. STM 3843 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG2 organism_group=Chloroflexi
ABC transporter permease
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b2_sep16_scaffold_411_5
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4024..4743
DNA (720bp) protein (240aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
High-affinity branched-chain amino acid transport ATP-binding protein Tax=environmental samples RepID=Q649D1_9ARCH bin=RBG2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacillariophyta tax=RBG2 organism_group=Chloroflexi
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b2_sep16_scaffold_411_6
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4748..5452
DNA (705bp) protein (235aa)
ABC transporter, ATP-binding protein Tax=delta proteobacterium NaphS2 RepID=D8F6G4_9DELT bin=RBG2 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG2 organism_group=Chloroflexi
ABC transporter-like protein
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b2_sep16_scaffold_411_7
Mesorhizobium sp. LSJC265A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5622..6356
DNA (735bp) protein (245aa)
UPI0003CF46F0 related cluster Tax=unknown RepID=UPI0003CF46F0
ABC transporter {ECO:0000313|EMBL:ESX14766.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC265A00.;"
ABC transporter
PLM4_90_b2_sep16_scaffold_411_8
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6340..7074
DNA (735bp) protein (245aa)
UPI0003CEEC4E related cluster Tax=unknown RepID=UPI0003CEEC4E
ABC transporter
Tax=RBG_13_Deltaproteobacteria_53_10_curated
PLM4_90_b2_sep16_scaffold_411_9
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7078..7332
DNA (255bp) protein (85aa)
Inner-membrane translocator Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y861_MESOW
inner-membrane translocator
Uncharacterized protein {ECO:0000313|EMBL:ESY66854.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
PLM4_90_b2_sep16_scaffold_411_10
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7403..8182
DNA (780bp) protein (260aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
hypothetical protein Tax=Sphingobium sp. YL23 RepID=UPI0003AA90CF
Tax=BJP_IG2069_Desfulfarculales_53_13
PLM4_90_b2_sep16_scaffold_411_11
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

Not on your lists

8497..10395
DNA (1899bp) protein (633aa)
Inner-membrane translocator Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y861_MESOW
inner-membrane translocator
Tax=RBG_16_Chloroflexi_60_22_curated
PLM4_90_b2_sep16_scaffold_411_12
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10611..11831
DNA (1221bp) protein (407aa)
UPI0003CDDA5B related cluster Tax=unknown RepID=UPI0003CDDA5B
Extracellular ligand-binding receptor
Tax=BJP_IG2069_Desfulfarculales_53_13
PLM4_90_b2_sep16_scaffold_411_13
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12343..13107
DNA (765bp) protein (255aa)
Short-chain dehydrogenase/reductase SDR Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M8F3_GEODF
short-chain dehydrogenase/reductase SDR
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM4_90_b2_sep16_scaffold_411_14
unknown

Not on your lists

13284..13448
DNA (165bp) protein (55aa)

This feature has no annotations

PLM4_90_b2_sep16_scaffold_411_15
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13576..15213
DNA (1638bp) protein (546aa)
Carboxyltransferase Tax=Mycobacterium thermoresistibile ATCC 19527 RepID=G7CH62_MYCTH
carboxyltransferase
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b2_sep16_scaffold_411_16
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15368..16852
DNA (1485bp) protein (495aa)
det:DET0120 accC; pyruvate carboxylase subunit A (EC:6.4.1.1) bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
pycA; pyruvate carboxyl transferase subunit A (EC:6.4.1.1)
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b2_sep16_scaffold_411_17
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16907..17620
DNA (714bp) protein (238aa)
3-oxoacid CoA-transferase subunit A (EC:2.8.3.5); K01028 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
3-oxoadipate CoA-transferase
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b2_sep16_scaffold_411_18
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17617..18279
DNA (663bp) protein (221aa)
butyryl-CoA:acetate CoA transferase (EC:2.8.3.8)
Succinyl-CoA:3-ketoacid-CoA transferase Tax=Brevibacillus panacihumi W25 RepID=V6ME67_9BACL
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b2_sep16_scaffold_411_19
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

Not on your lists

18360..19361
DNA (1002bp) protein (334aa)
Uncharacterized protein Tax=delta proteobacterium NaphS2 RepID=D8F4P6_9DELT
hypothetical protein
Tax=RBG_13_Chloroflexi_51_52_curated
PLM4_90_b2_sep16_scaffold_411_20
unknown

Not on your lists

comp(19225..19626)
DNA (402bp) protein (134aa)

This feature has no annotations

PLM4_90_b2_sep16_scaffold_411_21
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19728..20147
DNA (420bp) protein (140aa)
hypothetical protein Tax=Alicyclobacillus pohliae RepID=UPI00036DB2E0
acetyl-CoA acetyltransferase
Tax=RBG_13_Deltaproteobacteria_53_10_curated
Displaying 21 items

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