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PLM4_90_b2_sep16_scaffold_481

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_481_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..152
DNA (150bp) protein (50aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_481_2
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

218..1213
DNA (996bp) protein (332aa)
oxidoreductase Tax=Thermodesulfobacterium thermophilum RepID=UPI0003B58FD2
oxidoreductase
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_481_3
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1284..2189
DNA (906bp) protein (302aa)
Lipoprotein, putative Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YJW1_THEYD
lipoprotein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_481_4
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2263..2466
DNA (204bp) protein (68aa)
Regulatory protein, FmdB family Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R8L0_AMMDK
FmdB family regulatory protein
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b2_sep16_scaffold_481_5
unknown

Not on your lists

comp(2774..2974)
DNA (201bp) protein (67aa)

This feature has no annotations

PLM4_90_b2_sep16_scaffold_481_6
Smithella sp. D17, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3103..3324)
DNA (222bp) protein (74aa)
Membrane protein {ECO:0000313|EMBL:KFZ44432.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. D17.;"
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
PLM4_90_b2_sep16_scaffold_481_7
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3727..3987)
DNA (261bp) protein (87aa)
Uncharacterized protein Tax=Penicillium digitatum (strain PHI26 / CECT 20796) RepID=K9FIG9_PEND2
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_50_11_curated
PLM4_90_b2_sep16_scaffold_481_8
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3936..4175)
DNA (240bp) protein (80aa)
50S ribosomal protein L17 Tax=uncultured bacterium RepID=K1ZNW8_9BACT
50S ribosomal protein L17
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b2_sep16_scaffold_481_9
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4185..5201)
DNA (1017bp) protein (339aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAU6_GEOUR
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_481_10
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5214..5840)
DNA (627bp) protein (209aa)
30S ribosomal protein S4 bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
rpsD; 30S ribosomal protein S4
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b2_sep16_scaffold_481_11
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5964..6353)
DNA (390bp) protein (130aa)
30S ribosomal protein S11 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NJB3_DESAR
30S ribosomal protein S11
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b2_sep16_scaffold_481_12
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6441..6845)
DNA (405bp) protein (135aa)
30S ribosomal protein S13 Tax=Syntrophus aciditrophicus (strain SB) RepID=RS13_SYNAS
rpsM; 30S ribosomal protein S13
Tax=RBG_13_Deltaproteobacteria_53_10_curated
PLM4_90_b2_sep16_scaffold_481_13
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7068..7286)
DNA (219bp) protein (73aa)
translation initiation factor 1
Translation initiation factor IF-1 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b2_sep16_scaffold_481_14
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7306..7959)
DNA (654bp) protein (218aa)
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=KAD_GEODF
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_481_15
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8003..9331)
DNA (1329bp) protein (443aa)
Protein translocase subunit SecY Tax=Desulfococcus multivorans DSM 2059 RepID=S7T9D4_DESML
secY; preprotein translocase subunit SecY
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_481_16
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9328..9771)
DNA (444bp) protein (148aa)
50S ribosomal protein L15 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CJK4_SYNLT
50S ribosomal protein L15
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_481_17
unknown

Not on your lists

9810..9983
DNA (174bp) protein (58aa)

This feature has no annotations

PLM4_90_b2_sep16_scaffold_481_18
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9980..10474)
DNA (495bp) protein (165aa)
30S ribosomal protein S5 bin=GWC2_Proteo_65_14_Ab886 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
rpsE; 30S ribosomal protein S5
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_481_19
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10489..10806)
DNA (318bp) protein (106aa)
50S ribosomal protein L18 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DYD5_9FIRM
50S ribosomal protein L18
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_481_20
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10893..11429)
DNA (537bp) protein (179aa)
50S ribosomal protein L6 bin=GWF2_Methylomirabilis_70_14 species=Slackia heliotrinireducens genus=Slackia taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rplF; 50S ribosomal protein L6
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_481_21
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11593..12126)
DNA (534bp) protein (178aa)
30S ribosomal protein S8 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=RS8_CALS8
30S ribosomal protein S8
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_481_22
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12232..12771)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 Tax=Geobacter uraniireducens (strain Rf4) RepID=RL5_GEOUR
rplE; 50S ribosomal protein L5
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b2_sep16_scaffold_481_23
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12780..13109)
DNA (330bp) protein (110aa)
50S ribosomal protein L24 bin=GWC2_Deltaproteobacteria_42_51 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
50S ribosomal protein L24
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_481_24
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13185..13553)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 Tax=Geobacter metallireducens RepID=RL14_GEOMG
rplN; 50S ribosomal protein L14
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_481_25
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13641..13958)
DNA (318bp) protein (106aa)
30S ribosomal protein S17 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NJD0_DESAR
30S ribosomal protein S17
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_481_26
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14042..14242)
DNA (201bp) protein (67aa)
50S ribosomal protein L29 Tax=Lactobacillus delbrueckii RepID=RL29_LACDA
50S ribosomal protein L29
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_481_27
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14239..14655)
DNA (417bp) protein (139aa)
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 bin=GWC2_NOV_55_46 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
50S ribosomal protein L16
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_481_28
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14833..15264)
DNA (432bp) protein (144aa)
30S ribosomal protein S3 Tax=Geobacter metallireducens RepID=RS3_GEOMG
30S ribosomal protein S3
Tax=RBG_16_Deltaproteobacteria_50_11_curated
PLM4_90_b2_sep16_scaffold_481_29
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15343..15681)
DNA (339bp) protein (113aa)
50S ribosomal protein L22 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=RL22_ALKOO
rplV; 50S ribosomal protein L22
Tax=RBG_16_Deltaproteobacteria_50_11_curated
PLM4_90_b2_sep16_scaffold_481_30
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15697..15990)
DNA (294bp) protein (98aa)
30S ribosomal protein S19 Tax=Bilophila RepID=E5Y772_BILWA
30S ribosomal protein S19
Tax=RBG_16_Deltaproteobacteria_49_23_curated
Displaying items 1-30 of 36 in total

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