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PLM4_90_b2_sep16_scaffold_529

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_529_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130..891)
DNA (762bp) protein (254aa)
Outer membrane protein bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ompA; outer membrane protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_529_2
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(919..1188)
DNA (270bp) protein (90aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_529_3
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1417..1677)
DNA (261bp) protein (87aa)
hypothetical protein Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI0003761A1F
yhs domain-containing protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_529_4
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1758..2243)
DNA (486bp) protein (162aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B4B2CB
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_529_5
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2274..2447)
DNA (174bp) protein (58aa)
Sec-independent protein translocase protein TatA bin=GWC2_Proteo_65_14_Ab886 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
tatA; twin arginine translocase protein A
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b2_sep16_scaffold_529_trna_1
unknown

Not on your lists

comp(2538..2627)
DNA (90bp)
transferRNA SeC(p)
PLM4_90_b2_sep16_scaffold_529_6
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2943..3470
DNA (528bp) protein (176aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_529_7
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3486..4094)
DNA (609bp) protein (203aa)
ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA (EC:3.1.3.5)
5'-nucleotidase bin=GWF1_Spirochaetes_60_12 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_529_8
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4979..6409
DNA (1431bp) protein (477aa)
Dihydrolipoyl dehydrogenase Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LLM1_SYNFM
dihydrolipoamide dehydrogenase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_529_9
unknown

Not on your lists

comp(6456..6605)
DNA (150bp) protein (50aa)

This feature has no annotations

PLM4_90_b2_sep16_scaffold_529_10
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6709..6981)
DNA (273bp) protein (91aa)
hypothetical protein Tax=Thermodesulfatator atlanticus RepID=UPI0003B4B1DA
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_529_11
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7100..7810)
DNA (711bp) protein (237aa)
Laccase family multicopper oxidase bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_529_12
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7970..8908)
DNA (939bp) protein (313aa)
Pseudouridine synthase bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
rluD; 23S rRNA pseudouridines 1911, 1915, 1917 synthase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_529_13
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9205..10638)
DNA (1434bp) protein (478aa)
L-seryl-tRNA selenium transferase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CBW0_9CLOT
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
Displaying 14 items

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