ggKbase home page

PLM4_90_b2_sep16_scaffold_1099

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_1099_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


162..422
DNA (261bp) protein (87aa)
50S ribosomal protein L27 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=RL27_PELCD
rpmA; 50S ribosomal protein L27
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_1099_2
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

473..1507
DNA (1035bp) protein (345aa)
obgE; GTPase ObgE; K03979 GTP-binding protein bin=bin1_lowGC species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
GTP-binding protein Obg/CgtA
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b2_sep16_scaffold_1099_3
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1485..2621
DNA (1137bp) protein (379aa)
Glutamate 5-kinase Tax=Geobacter metallireducens RepID=PROB_GEOMG
proB; gamma-glutamyl kinase
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_1099_4
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2618..3886
DNA (1269bp) protein (423aa)
gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase bin=GWC2_Deltaproteobacteria_56_8 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_1099_5
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4245..4721
DNA (477bp) protein (159aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_1099_6
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4812..5177
DNA (366bp) protein (122aa)
Iojap protein family bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
iojap family protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_1099_7
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5134..5598
DNA (465bp) protein (155aa)
DnaK suppressor protein DksA bin=GWC2_Pelobacter_58_13 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b2_sep16_scaffold_1099_8
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5603..6970
DNA (1368bp) protein (456aa)
hypothetical protein
Putative uncharacterized protein bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_1099_9
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7278..7667
DNA (390bp) protein (130aa)
Amidophosphoribosyltransferase family protein bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
phosphoribosyltransferase
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
Displaying 9 items

View Taxonomy