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PLM4_90_b2_sep16_scaffold_4515

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_4515_1
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..625)
DNA (624bp) protein (208aa)
Rhomboid family protein bin=GWD2_Nitrospirae-related_57_8 species=Microcoleus sp. PCC 7113 genus=Microcoleus taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
rhomboid family protein
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b2_sep16_scaffold_4515_2
unknown

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comp(636..926)
DNA (291bp) protein (97aa)

This feature has no annotations

PLM4_90_b2_sep16_scaffold_4515_3
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1105..1302)
DNA (198bp) protein (66aa)
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM4_90_b2_sep16_scaffold_4515_4

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2086..2370
DNA (285bp) protein (95aa)
YgiT-type zinc finger domain protein Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KT48_9FIRM
Marine sediment metagenome DNA, contig: S01H1_S39613 {ECO:0000313|EMBL:GAG48333.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
YgiT-type zinc finger domain protein
PLM4_90_b2_sep16_scaffold_4515_5
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2549..2860
DNA (312bp) protein (104aa)
Uncharacterized protein Tax=Bacillus sp. 17376 RepID=V6T0E0_9BACI
Rieske (2Fe-2S) domain-containing protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_4515_6
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2949..3893)
DNA (945bp) protein (315aa)
TPR domain protein, putative bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
TPR repeat-containing protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_4515_7
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3893..4462)
DNA (570bp) protein (190aa)
Peptidoglycan-associated lipoprotein Tax=Desulfovibrio sp. X2 RepID=S7TK69_9DELT
OmpA family outer membrane lipoprotein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b2_sep16_scaffold_4515_8
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4609..5097)
DNA (489bp) protein (163aa)
Protein TolB bin=GWF2_Geobacter_54_21 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
tol-pal system beta propeller repeat protein TolB
Tax=RBG_16_Deltaproteobacteria_47_11_curated
Displaying 8 items

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