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PLM4_90_b2_sep16_scaffold_584

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b2_sep16_scaffold_584_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1..1485)
DNA (1485bp) protein (495aa)
Probable acetyl-CoA synthetase Tax=uncultured archaeon RepID=Q2Y4P6_9ARCH
Acetyl-CoA synthetase {ECO:0000313|EMBL:KCZ70712.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
acetyl-CoA synthetase
PLM4_90_b2_sep16_scaffold_584_2
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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1887..2915
DNA (1029bp) protein (343aa)
Coenzyme F420-dependent hydrogenase beta subunit {ECO:0000313|EMBL:BAJ49707.1}; EC=1.12.98.1 {ECO:0000313|EMBL:BAJ49707.1};; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterraneum.;"
coenzyme F420-dependent hydrogenase beta subunit (EC:1.12.98.1)
Coenzyme F420-dependent hydrogenase beta subunit Tax=Candidatus Caldiarchaeum subterraneum RepID=E6NBK1_9ARCH
PLM4_90_b2_sep16_scaffold_584_3
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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3071..3838
DNA (768bp) protein (256aa)
Electron transfer flavoprotein beta-subunit Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8RC90_THETN
FixA; electron transfer flavoprotein subunit beta
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b2_sep16_scaffold_584_4
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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3844..4809
DNA (966bp) protein (322aa)
Electron transfer flavoprotein, alpha subunit Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7UAC1_9EURY
electron transfer flavoprotein, alpha subunit
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b2_sep16_scaffold_584_5
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(5009..5827)
DNA (819bp) protein (273aa)
Heterodisulfide reductase, subunit B Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TF24_9EURY
CoB--CoM heterodisulfide reductase
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b2_sep16_scaffold_584_6
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(5887..6396)
DNA (510bp) protein (170aa)
Heterodisulfide reductase, subunit C Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TFN4_9EURY
hdrC-1; CoB--CoM heterodisulfide reductase iron-sulfur subunit C
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b2_sep16_scaffold_584_7
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(6398..8413)
DNA (2016bp) protein (672aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D5H3_METSW
4Fe-4S ferredoxin
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b2_sep16_scaffold_584_8
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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8611..9714
DNA (1104bp) protein (368aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
Glutamine--scyllo-inositol transaminase Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D2F2_METSW
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b2_sep16_scaffold_584_9
Thermococcus paralvinellae, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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9791..11125
DNA (1335bp) protein (445aa)
Uncharacterized protein Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LMI9_THEBM
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF80452.1}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus paralvinellae.;"
PLM4_90_b2_sep16_scaffold_584_10
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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11122..11505
DNA (384bp) protein (128aa)
Uncharacterized protein Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RYF9_THEPD
hypothetical protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b2_sep16_scaffold_584_11
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(11502..11981)
DNA (480bp) protein (160aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b2_sep16_scaffold_584_12
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(12042..12365)
DNA (324bp) protein (108aa)
30S ribosomal protein S25e Tax=Sulfolobus solfataricus RepID=RS25_SULSO
30S ribosomal protein S25
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b2_sep16_scaffold_584_13
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(12519..12779)
DNA (261bp) protein (87aa)
Archaeal histone A Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=HARA_THEKO
hfoA; archaeal histone A2
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b2_sep16_scaffold_584_14
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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12991..13770
DNA (780bp) protein (260aa)
TatD-related deoxyribonuclease:radical SAM family protein; K03424 TatD DNase family protein [EC:3.1.21.-] bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
TatD-related deoxyribonuclease
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b2_sep16_scaffold_584_15
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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13858..14088
DNA (231bp) protein (77aa)
Ribosomal protein S17E Tax=uncultured Acidilobus sp. CIS RepID=V4LQ56_9CREN
30S ribosomal protein S17
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b2_sep16_scaffold_584_16
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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14137..14514
DNA (378bp) protein (126aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b2_sep16_scaffold_584_17
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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15256..15531
DNA (276bp) protein (92aa)
Elongation factor 1-beta Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=EF1B_STAMF
ef1B; elongation factor 1-beta
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b2_sep16_scaffold_584_18
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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15629..18040
DNA (2412bp) protein (804aa)
AAA family ATPase, CDC48 subfamily Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TTA3_9ARCH
Cell division protein FtsH
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b2_sep16_scaffold_584_19
unknown

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18117..18575
DNA (459bp) protein (153aa)

This feature has no annotations

Displaying 19 items

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