ggKbase home page

PLM4_90_coex_sep16_scaffold_5042

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_coex_sep16_scaffold_5042_1
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..245)
DNA (243bp) protein (81aa)
ABC transporter-related protein bin=GWC2_Nitrospirae_57_13 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
ABC transporter-like protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_5042_2
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(298..1278)
DNA (981bp) protein (327aa)
cte:CT0377 hypothetical protein; K13888 macrolide-specific efflux protein MacA bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_5042_3
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1268..2536)
DNA (1269bp) protein (423aa)
Outer membrane efflux protein bin=GWF2_OP3_38_59 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
outer membrane efflux protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_5042_4
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2763..3458)
DNA (696bp) protein (232aa)
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_5042_5
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3463..4698)
DNA (1236bp) protein (412aa)
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_5042_6
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5141..5887)
DNA (747bp) protein (249aa)
Putative membrane protein Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C4U5_DESTA
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_5042_7
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(6079..6336)
DNA (258bp) protein (86aa)
Putative uncharacterized protein bin=GWC2_Nitrospirae-rel_56_14 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
PLM4_90_coex_sep16_scaffold_5042_8
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6548..7060)
DNA (513bp) protein (171aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDQ7_NIAKG
hypothetical protein
Thioesterase {ECO:0000313|EMBL:EZH74231.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
PLM4_90_coex_sep16_scaffold_5042_9
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7106..7939)
DNA (834bp) protein (278aa)
Zn-dependent protease with chaperone function Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LYH8_SYNAS
Zn-dependent protease with chaperone function
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_5042_10
unknown

Not on your lists

comp(7973..8353)
DNA (381bp) protein (127aa)

This feature has no annotations

PLM4_90_coex_sep16_scaffold_5042_11
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8368..8838)
DNA (471bp) protein (157aa)
Uncharacterized protein Tax=Thiorhodovibrio sp. 970 RepID=H8YX30_9GAMM
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_5042_12
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8957..9553)
DNA (597bp) protein (199aa)
Putative uncharacterized protein Tax=Oscillatoria sp. PCC 6506 RepID=D8G6V4_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:CBN58344.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506.;"
hypothetical protein
Displaying 12 items

View Taxonomy