ggKbase home page

PLM4_90_coex_sep16_scaffold_1715

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_coex_sep16_scaffold_1715_1
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..860
DNA (858bp) protein (286aa)
Putative selenium metabolism protein, YedE family Tax=Desulfococcus multivorans DSM 2059 RepID=S7UKT8_DESML
membrane protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1715_2
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

873..1091
DNA (219bp) protein (73aa)
Putative uncharacterized protein Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YGA5_THEYD
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_1715_3
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1185..2360
DNA (1176bp) protein (392aa)
cysteine desulfurase (EC:2.8.1.7 4.4.1.16)
Cysteine desulfurase / selenocysteine lyase Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LX53_SYNAS
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_1715_4
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2596..3108)
DNA (513bp) protein (171aa)
Uncharacterized protein Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KU69_SOLCM
phospholipid methyltransferase
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_1715_5
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3197..3544)
DNA (348bp) protein (116aa)
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_1715_6
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3641..6112)
DNA (2472bp) protein (824aa)
CzcA family heavy metal efflux protein; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA bin=bin1_lowGC species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
CzcA family heavy metal efflux protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_coex_sep16_scaffold_1715_7
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6066..6947)
DNA (882bp) protein (294aa)
CzcA family heavy metal efflux protein; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA bin=bin1_lowGC species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
CzcA family heavy metal efflux protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_coex_sep16_scaffold_1715_8
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7062..8291)
DNA (1230bp) protein (410aa)
Efflux transporter, RND family, MFP subunit Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMD7_9BACT
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_coex_sep16_scaffold_1715_9
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8307..9584)
DNA (1278bp) protein (426aa)
Outer membrane efflux protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMD6_9BACT
outer membrane efflux protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_coex_sep16_scaffold_1715_10
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9831..10460)
DNA (630bp) protein (210aa)
methyltransferase (EC:2.1.1.-)
Methyltransferase Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LWA8_SYNAS
Tax=RBG_16_Deltaproteobacteria_54_18_curated
PLM4_90_coex_sep16_scaffold_1715_11
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10450..11703)
DNA (1254bp) protein (418aa)
homoserine O-acetyltransferase (EC:2.3.1.31)
Homoserine O-acetyltransferase Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K434_DEHLB
Tax=RBG_16_Deltaproteobacteria_54_18_curated
PLM4_90_coex_sep16_scaffold_1715_12
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11727..12572)
DNA (846bp) protein (282aa)
Cysteine synthase bin=GWF2_Lentisphaerae_57_35 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
cysteine synthase
Tax=RBG_16_Deltaproteobacteria_54_18_curated
PLM4_90_coex_sep16_scaffold_1715_13
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12615..13934)
DNA (1320bp) protein (440aa)
O-acetylhomoserine/O-acetylserine sulfhydrylase (EC:2.5.1.49)
O-acetylhomoserine/O-acetylserine sulfhydrylase bin=GWC2_Syntrophobacterales_56_13 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_1715_14
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14386..14790)
DNA (405bp) protein (135aa)
Putative uncharacterized protein Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QD37_DESAH
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_1715_15
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14902..15726)
DNA (825bp) protein (275aa)
PP-loop domain protein Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S103_THEOJ
PP-loop domain-containing protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_coex_sep16_scaffold_1715_16
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15817..17325)
DNA (1509bp) protein (503aa)
Putative iron-sulfur cluster-binding protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKS5_9BACT
iron-sulfur cluster-binding protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1715_17
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17518..19218)
DNA (1701bp) protein (567aa)
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1)
Succinate dehydrogenase, flavoprotein subunit A (SdhA) Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29576_ARCFU
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_1715_18
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19340..19465)
DNA (126bp) protein (42aa)
Fumarate hydratase class I, anaerobic Tax=Clostridium botulinum C str. Eklund RepID=B1B7A4_CLOBO
hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta region
Tax=RBG_16_Deltaproteobacteria_54_11_curated
Displaying 18 items

View Taxonomy