ggKbase home page
Advanced Search
Search Help

PLM4_90_coex_sep16_scaffold_62_10

Organism: PLM4_90_coex_sep16_Deltaproteobacteria_55_11

near complete RP 48 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 8528..12685

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 1350.0
  • Bit_score: 2044
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 72.6
  • Coverage: 1372.0
  • Bit_score: 2014
  • Evalue 0.0
Tax=RBG_16_Deltaproteobacteria_54_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 1385.0
  • Bit_score: 2644
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Deltaproteobacteria_54_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4158
TTGGAAGATTATGTGCTGTCGTTTTTTGAGAAACCCAAGGACCCGTCGAGCTTTAATGCGATCAAGATCGCCGTGGCCTCCCCGGAGCAGATCAGGGGTTGGTCCCACGGCGAGGTAAAGAAGCCGGAGACTATAAACTACCGGACCTTCAAGCCGGAGCGGGACGGTCTTTTTTGTGCCAGGATATTCGGACCGGTAAAGGACTATGAGTGCAACTGCGGAAAATACAAGCGGATGAAACACAGGGGGATCGTTTGTGAGAAGTGCGGGGTTGAAGTAATTCAGACCAAGGTCCGCCGGGAGCGTATGGGACATATCGAGTTGGCGGCACCCGCAGCCCACATCTGGTTCTTGAAGAGCATACCGAGCAAGATCGGGATGTTCCTCGATATGACCTTGAAGGAGCTTGAGCGGATTCTTTATTTCGAGTCCTATGTCGTCATCGATCCCAAGAACATTCCCCTCAAGAAGGGGGATCTCATCAGCGAAGAAAAATACCGGGAGCTCAAAGGGAAGTACGGCGGGGACGCCATAGAGGCCGGCGTCGGAGCGGAGGCCGTGAAAAAACTCCTGAAACAAGTGAACATAAAGGAGACGGCCGAGCAGCTCCGCGTTGAGATGAAGGAGACCCAGTCCGAGGCCAAGCGCAAAAAGTTGGCTAAACGCTTGAGGGTTATCGAGGCCTTTCGGGATTCCGGGAACATGCCGGAGTGGATGATCTTGGACGTCATCCCCGTCATCCCCCCCGATCTGAGGCCTCTGGTTCCCCTTGACGGAGGGAGGTTTGCCACCTCCGATCTCAATGACCTCTATCGAAGGGTGATCAACAGAAACAATCGTTTAAAGAGACTTTTAGAATTAAACGCCCCGGACATTATCATCCGCAATGAAAAGAGGATGCTTCAGGAGGCGGTCGATGCCCTCTTCGATAACGGCAAGAGGGGCAGGGTGATCACCGGTGCCAATAAAAAACCGCTGAGGTCATTGAGCGACATGCTGAGGGGTAAACAGGGAAGATTCCGCCAGAACCTCTTGGGCAAGCGCGTGGACTACTCCGGGAGATCGGTCATCGTCATTGGACCGGAATTGCGCCTCCATCAGTGTGGCCTGCCCAAGAAGATGGCCTTGGAGCTTTTCAAGCCCTTTATCTACAATAAGTTGGAGGAAAGGGGCTATGTGACCACGGTTAAAAGTGCCAAAAAGATGGTGGAAAAGGAGAGACCCGAGGTCTGGGATATCCTCGAGGAGGTGATTCGGGAACACCCCATTCTCCTCAACAGGGCCCCGACGCTGCACCGGCTGGGCATCCAGGCCTTTGAACCCCTCCTCATAGAGGGGAAGGCCATTCAGCTCCACCCGCTCGTCTGCCTTGCCTTCAACGCCGACTTTGACGGGGATCAGATGGCCGTGCACGTCCCCCTCTCCGTGGAGGCCCAGACCGAGGCGCGGGTGCTGATGATGTCCACCAATAATATCCTCTCCCCTGCCCATGGGAAGCCTATTATCGTCCCCACCCAGGACATCGTCTTGGGTCTCTATTACATGACGCGGGAAAAGGAATATGCCAAGGGGGAGGGGAAGATCTTCGCCAACCCCGAGGAGGTACGGATCGCCTATGATGCCCGTGAGGTAGATATGCAGGCCCGCATCAAGGTGCGGATGAACGAGCATGTGGTGGAGACAACCCCGGGGAGGATCATCCTCAGAGAAGTCGTTCCCCAGGAGGTGCCCTTTGAATTGATCAATAGGGTGATGAACAAGAAGGCGGTGGCCAACCTCATCGACTATACATACCGGGTGGCGGGGAACAAGAAGACCGTCATCTTGGCGGATAAATTGAAAGATTTGGGCTTTGCCTACGTCACCAAATCGGGACTCTCCATCGGGATCGACGATATCCGCGTCCCCGCTCGCAAACCCCACCTCATGGAGCAGGCCACCAAGGAGGTGGATAAGATCAGACAGCAATACGTCGATGGGCTGATCACCGATGGTGAGCGGTATAACAAGGTGATCGACATCTGGGCTCAGCTCACCGAAGAGATCGCCGATGAGATGATGAAGGAGTTGGGGACGGAGCGGATAAAGGATCCCGAGGGTAAAGAAAAGGCAGTGCCCAGCTTTAACCCCATCTTTATGATGGCCGATTCAGGGGCGCGGGGCAGCGCCCAGCAGATACGCCAGTTGGCCGGGATGAGGGGTTTGATGGCCAAGCCGTCAGGAGAGATCATCGAGACCCCTATCACCGCAAACTTCAGGGAAGGACTGAGCGTGTTGCAGTACTTCGTCTCCACCCACGGTGCGCGGAAGGGGTTGGCGGATACCGCCCTGAAGACAGCCAACTCCGGATATCTCACCAGAAGATTAGTGGATGTTGCCCAGGACATCATCATTTACGAATACGATTGCGGCACCATGGACGGGATATACGTCTCCTCCCTCGTTGAAGGCGGCGAGATCATCGAACCCATGGTGGAGAGGATTCTGGGAAGGGTGGCCCTGGAGGACATCAAGGACTCCTTTACCAATGAGGTCATCGTCAAGGCTAGCCACGAGATCAACGAGGAGGCGCTACAGAGGATCGCCGATGCGGGATTGGATCGCGTGAAAATTCGCTCCGTGCTGACCTGCGAGTCCAGCCATGGTGTCTGTGCCCTCTGTTACGGAAGAGACCTCGCCCGCGGCCGTATCGTCGATATCGGCGAGGCGGTCGGAGTCATAGCCGCCCAGTCCATCGGGGAGCCGGGGACCCAGCTCACCATGAGGACCTTCCATATCGGTGGCACGGCGAGCAGGCGGGTGGAGGAGACCGCCCTTGAGGCCAAGATGGACGGGACCGTCAAGTTCATCGATATGCGGACCGTCCGCAACAGAGAGGGCATGCTGGTGGTGATGAGCCGCAAGGGCGAGATTGCCATCCTCGATGACGAAGGAAGGGAACGGAAGCGGTATCCTGCGGTCTATGGGGCGAAATTGGCGGTGGGAGAGGGGAAGAAGGTGAAGGAAGGAGAGCTCATGGCGGAGTGGGACCCTTATACCATCCCCATCATCACCGAGGTACCCGGCTTGGTGAAGTTCGGCGATATCACGGAGGGGGTCACCATGCAGGAGCAGGTGGATGAGGTGACCGGCCACGCCCACAAGGTCATCATCGAGAGCAAGGAACTTGATCTCAGGCCGCGCATATCCATCAAGCAGGAAAGGGTCGATACCGAAGGGAAGAAGGCCATGGAGACCGAGGCCAGATACATCCTGCCCGTCGGCTCCCATATCTATGTGAAGGAAGGCGAGCCTGTGGAGGCAGGCGACGTCTTGGTGAAGATACCGCGGGAGACCACGAAGACCAAGGACATCACCGGCGGGCTCCCCCGCGTGGCAGAGCTCTTTGAGGCGAGACGGCCTAAAGAGTATGCCCTTATTAGCGAGATAGACGGAGCAGTAAGCTTCGGCAAGATGCTCAAGGGAAAGCGAAAGGTGATTGTTACCCCTGAGGTAGGCGAACCGAAGGAATATTCCATCCCCAAGGGGAAACACATCAGCGTCCGCGAGGGGGATGTGGTCAAGGCGGGAGAGCCCCTCATGGACGGCAGCTCCAACCCGCATGATATCCTCAAGGTCTTAGGGGACAAGGAGTTGGCCCGGTTTTTGGTCGATGAGATCCAGGAGGTCTATCAGCTGCAGGGCGTCAAGATCAACGATAAACACATCGAGATCATCGTGAGGCAGATGCTCAAGAGGGTGAAGATCCGCGACGTGGGGGATACGAGGTTTATCGTGGACGAGCAGGTGGAAAAACACCTTTTTAAGCAGGAAAACGAGCGGGTCCTCAAGGAAGGGGGAAAACCGGCCATTGCCGACCCCCTGTTCCTGGGCATCACCAAGGCCTCGCTCATCACGGATAGTTGGGTATCGGCCGCCTCCTTTCAGGAGACCACGCGCGTCCTGACCCAGGCAGCAGTCGAGGGGAGGATCGATACGTTACGGGGACTGAAAGAAAACGTCATCATGGGGAGATTGATCCCCGCGGGCACCGGCAATCCCCGCTATCGCGATATCACGCCTGTTGTAGAGGGAGGCTATCCTCCTTCCCTGGAGGCGATGGACATAGCCGGAGAAGGCAAGGAGCAGGCAGAAGAGGGTGCTCCGGGAGCAGATTAA
PROTEIN sequence
Length: 1386
LEDYVLSFFEKPKDPSSFNAIKIAVASPEQIRGWSHGEVKKPETINYRTFKPERDGLFCARIFGPVKDYECNCGKYKRMKHRGIVCEKCGVEVIQTKVRRERMGHIELAAPAAHIWFLKSIPSKIGMFLDMTLKELERILYFESYVVIDPKNIPLKKGDLISEEKYRELKGKYGGDAIEAGVGAEAVKKLLKQVNIKETAEQLRVEMKETQSEAKRKKLAKRLRVIEAFRDSGNMPEWMILDVIPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELNAPDIIIRNEKRMLQEAVDALFDNGKRGRVITGANKKPLRSLSDMLRGKQGRFRQNLLGKRVDYSGRSVIVIGPELRLHQCGLPKKMALELFKPFIYNKLEERGYVTTVKSAKKMVEKERPEVWDILEEVIREHPILLNRAPTLHRLGIQAFEPLLIEGKAIQLHPLVCLAFNADFDGDQMAVHVPLSVEAQTEARVLMMSTNNILSPAHGKPIIVPTQDIVLGLYYMTREKEYAKGEGKIFANPEEVRIAYDAREVDMQARIKVRMNEHVVETTPGRIILREVVPQEVPFELINRVMNKKAVANLIDYTYRVAGNKKTVILADKLKDLGFAYVTKSGLSIGIDDIRVPARKPHLMEQATKEVDKIRQQYVDGLITDGERYNKVIDIWAQLTEEIADEMMKELGTERIKDPEGKEKAVPSFNPIFMMADSGARGSAQQIRQLAGMRGLMAKPSGEIIETPITANFREGLSVLQYFVSTHGARKGLADTALKTANSGYLTRRLVDVAQDIIIYEYDCGTMDGIYVSSLVEGGEIIEPMVERILGRVALEDIKDSFTNEVIVKASHEINEEALQRIADAGLDRVKIRSVLTCESSHGVCALCYGRDLARGRIVDIGEAVGVIAAQSIGEPGTQLTMRTFHIGGTASRRVEETALEAKMDGTVKFIDMRTVRNREGMLVVMSRKGEIAILDDEGRERKRYPAVYGAKLAVGEGKKVKEGELMAEWDPYTIPIITEVPGLVKFGDITEGVTMQEQVDEVTGHAHKVIIESKELDLRPRISIKQERVDTEGKKAMETEARYILPVGSHIYVKEGEPVEAGDVLVKIPRETTKTKDITGGLPRVAELFEARRPKEYALISEIDGAVSFGKMLKGKRKVIVTPEVGEPKEYSIPKGKHISVREGDVVKAGEPLMDGSSNPHDILKVLGDKELARFLVDEIQEVYQLQGVKINDKHIEIIVRQMLKRVKIRDVGDTRFIVDEQVEKHLFKQENERVLKEGGKPAIADPLFLGITKASLITDSWVSAASFQETTRVLTQAAVEGRIDTLRGLKENVIMGRLIPAGTGNPRYRDITPVVEGGYPPSLEAMDIAGEGKEQAEEGAPGAD*