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PLM4_90_coex_sep16_scaffold_62

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_coex_sep16_scaffold_62_1
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..713
DNA (711bp) protein (237aa)
Elongation factor Tu Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NCP5_DESAR
translation elongation factor Tu
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_62_2
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

Not on your lists

710..883
DNA (174bp) protein (58aa)
acp:A2cp1_2367 elongation factor Tu (EC:2.7.7.4) bin=ACD17 species=ACD17 genus=ACD17 taxon_order=ACD17 taxon_class=ACD17 phylum=Clamydiae tax=ACD17 organism_group=Chlamydiae organism_desc=CvE6
translation elongation factor Tu
Tax=RBG_13_RIF03_48_7_curated
PLM4_90_coex_sep16_scaffold_62_trna_1
unknown

Not on your lists

1099..1172
DNA (74bp)
transferRNA Trp
PLM4_90_coex_sep16_scaffold_62_3
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1346..1441
DNA (96bp) protein (32aa)
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_62_4
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1482..2045
DNA (564bp) protein (188aa)
Transcription antitermination protein nusG bin=GWC2_Deltaproteobacteria_42_51 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
NusG antitermination factor
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_62_5
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2069..2497
DNA (429bp) protein (143aa)
50S ribosomal protein L11 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A9W3_THEID
50S ribosomal protein L11
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_62_6
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2509..3207
DNA (699bp) protein (233aa)
50S ribosomal protein L1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CE50_DESTA
ribosomal protein L1
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_62_7
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3249..3770
DNA (522bp) protein (174aa)
50S ribosomal protein L10 Tax=Syntrophus aciditrophicus (strain SB) RepID=RL10_SYNAS
50S ribosomal protein L10
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_62_8
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3804..4193
DNA (390bp) protein (130aa)
50S ribosomal protein L7/L12 Tax=Syntrophus aciditrophicus (strain SB) RepID=RL7_SYNAS
50S ribosomal protein L7/L12
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_62_9
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4321..8508
DNA (4188bp) protein (1396aa)
DNA-directed RNA polymerase subunit beta Tax=Geobacter sulfurreducens RepID=RPOB_GEOSL
DNA-directed RNA polymerase subunit beta
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_62_10
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8528..12685
DNA (4158bp) protein (1386aa)
DNA-directed RNA polymerase subunit beta' bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
DNA-directed RNA polymerase subunit beta'
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_62_11
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12682..13494)
DNA (813bp) protein (271aa)
putative aspartyl/asparaginyl beta-hydroxylase (Aspartate beta-hydroxylase) (Peptide-aspartate beta-dioxygenase) (EC:1.14.11.16)
Putative aspartyl/asparaginyl beta-hydroxylase (Aspartate beta-hydroxylase) (Peptide-aspartate beta-dioxygenase) Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QKP7_DESAH
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_62_12
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13475..14041)
DNA (567bp) protein (189aa)
Peptidoglycan-associated lipoprotein Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QJP8_DESB2
peptidoglycan-associated lipoprotein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_62_13
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14079..15386)
DNA (1308bp) protein (436aa)
Protein TolB Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDC0_GEOUR
WD40 domain-containing protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_62_14
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15390..16280)
DNA (891bp) protein (297aa)
LysR family transcriptional regulator Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00036D169A
LysR family transcriptional regulator
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_62_15
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16435..17400
DNA (966bp) protein (322aa)
Putative uncharacterized protein bin=GWF2_Bacteroidetes_41_61 species=Acinetobacter guillouiae genus=Acinetobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM4_90_coex_sep16_scaffold_62_16
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17587..18603
DNA (1017bp) protein (339aa)
hypothetical protein Tax=Geopsychrobacter electrodiphilus RepID=UPI00035EDA15
alpha/beta hydrolase fold protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_coex_sep16_scaffold_62_17
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18941..20488
DNA (1548bp) protein (516aa)
Alpha-2-macroglobulin domain protein 2 bin=GWC2_Syntrophus__56_31 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
Displaying 18 items

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