ggKbase home page

PLM4_90_coex_sep16_scaffold_497

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_coex_sep16_scaffold_497_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

417..881
DNA (465bp) protein (155aa)
Queuosine synthesis Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QNH2_VULDI
Queuosine synthesis
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM4_90_coex_sep16_scaffold_497_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

922..1248
DNA (327bp) protein (109aa)
Putative uncharacterized protein Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E7C8_METMS
6-pyruvoyl tetrahydropterin synthase and hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM4_90_coex_sep16_scaffold_497_3
unknown

Not on your lists

comp(1261..1995)
DNA (735bp) protein (245aa)

This feature has no annotations

PLM4_90_coex_sep16_scaffold_497_4
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(2053..2631)
DNA (579bp) protein (193aa)
Carbonic anhydrase/acetyltransferase, isoleucine patch superfamily Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BJ32_9EURY
Carbonic anhydrase/acetyltransferase, isoleucine patch superfamily
Tax=RBG_16_Euryarchaeota_68_13_curated
PLM4_90_coex_sep16_scaffold_497_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

2711..3427
DNA (717bp) protein (239aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM4_90_coex_sep16_scaffold_497_6
unknown

Not on your lists

comp(3429..3806)
DNA (378bp) protein (126aa)

This feature has no annotations

PLM4_90_coex_sep16_scaffold_497_7
unknown

Not on your lists

comp(3878..5104)
DNA (1227bp) protein (409aa)

This feature has no annotations

PLM4_90_coex_sep16_scaffold_497_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

5367..6209
DNA (843bp) protein (281aa)
nfo; putative endonuclease 4 (EC:3.1.21.2)
endonuclease Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B4ED06
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM4_90_coex_sep16_scaffold_497_9
Thermoplasmatales archaeon SCGC AB-540-F20, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(6222..7784)
DNA (1563bp) protein (521aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TDF0_9EURY
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:EMR74843.1}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-540-F20.;"
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
PLM4_90_coex_sep16_scaffold_497_10
CSP1_5_NC10, NC10, Bacteria

Not on your lists

7942..8220
DNA (279bp) protein (93aa)
Molybdopterin biosynthesis protein moeB bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Molybdopterin biosynthesis protein moeB
Tax=CSP1_5_NC10
PLM4_90_coex_sep16_scaffold_497_11
Thermoplasmatales archaeon SCGC AB-540-F20, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

8236..10008
DNA (1773bp) protein (591aa)
Aldehyde:ferredoxin oxidoreductase Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TDF4_9EURY
Aldehyde:ferredoxin oxidoreductase {ECO:0000313|EMBL:EMR74848.1}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-540-F20.;"
aldehyde:ferredoxin oxidoreductase
PLM4_90_coex_sep16_scaffold_497_12
Thermoplasmatales archaeon SCGC AB-540-F20, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

10008..10481
DNA (474bp) protein (158aa)
Fe-S-cluster-containing hydrogenase subunit Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TE26_9EURY
Fe-S-cluster-containing hydrogenase subunit {ECO:0000313|EMBL:EMR74847.1}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-540-F20.;"
4Fe-4S ferredoxin iron-sulfur binding domain protein
PLM4_90_coex_sep16_scaffold_497_13

Not on your lists

comp(10460..10729)
DNA (270bp) protein (90aa)
NAD(P)H-nitrite reductase Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7U7R4_9EURY
Marine sediment metagenome DNA, contig: S01H1_L02180 {ECO:0000313|EMBL:GAF71528.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM4_90_coex_sep16_scaffold_497_14
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11654..11896)
DNA (243bp) protein (81aa)
Uncharacterized protein Tax=delta proteobacterium NaphS2 RepID=D8F4I7_9DELT
hypothetical protein
Tax=BJP_IG2069_Desfulfarculales_53_13
PLM4_90_coex_sep16_scaffold_497_15

Not on your lists

comp(12033..12545)
DNA (513bp) protein (171aa)
Putative uncharacterized protein Tax=uncultured archaeon GZfos37D1 RepID=Q648G9_9ARCH
Marine sediment metagenome DNA, contig: S06H3_S23927 {ECO:0000313|EMBL:GAI47907.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM4_90_coex_sep16_scaffold_497_16
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

13118..13327
DNA (210bp) protein (70aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
PLM4_90_coex_sep16_scaffold_497_17

Not on your lists

13332..13586
DNA (255bp) protein (85aa)
Addiction module toxin, RelE/StbE family Tax=mine drainage metagenome RepID=T0YEM3_9ZZZZ
Addiction module toxin, RelE/StbE family {ECO:0000313|EMBL:EQD30297.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
RelE protein
PLM4_90_coex_sep16_scaffold_497_18
unknown

Not on your lists

comp(13665..14495)
DNA (831bp) protein (277aa)

This feature has no annotations

PLM4_90_coex_sep16_scaffold_497_19

Not on your lists

comp(14698..17223)
DNA (2526bp) protein (842aa)
Putative NADH:acceptor oxidoreductase (Fragment) Tax=Bacteria RepID=D2XBK1_9BACT
Putative NADH:acceptor oxidoreductase {ECO:0000313|EMBL:ADB04320.1}; Flags: Fragment;; species="Bacteria; environmental samples.;" source="bacterium enrichment culture clone N47.;"
bzdV; BzdV protein
PLM4_90_coex_sep16_scaffold_497_20
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17270..17545)
DNA (276bp) protein (92aa)
Ferredoxin bin=GWD2_Deltaproteobacteria_55_8 species=Thermoplasmatales archaeon SCGC AB-540-F20 genus=unknown taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
bzdM_fdx; ferredoxin protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_90_coex_sep16_scaffold_497_21
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(17554..18420)
DNA (867bp) protein (289aa)
Benzoyl-CoA reductase, delta subunit bin=GWB2_Ignavibacteria_35_12 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
benzoyl-CoA reductase, bzd-type, Q subunit
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM4_90_coex_sep16_scaffold_497_22
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria

Not on your lists

comp(18422..18733)
DNA (312bp) protein (104aa)
CoA-substrate-specific enzyme activase (EC:1.3.99.15)
Benzoyl coa reductase, alpha subunit Tax=candidate division ZIXI bacterium RBG-1 RepID=T0L702_9BACT
Tax=RBG_13_Aminicenantes_62_12_curated
PLM4_90_coex_sep16_scaffold_497_23
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(18730..19023)
DNA (294bp) protein (98aa)
Benzoyl coa reductase, alpha subunit bin=GWB2_Ignavibacteria_35_12 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
bcrD; benzoyl CoA reductase subunit
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM4_90_coex_sep16_scaffold_497_24

Not on your lists

comp(19028..20338)
DNA (1311bp) protein (437aa)
Benzoyl-CoA reductase, beta subunit Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MJD1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKN60632.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
benzoyl-CoA reductase, bzd-type, O subunit
PLM4_90_coex_sep16_scaffold_497_25
candidate division Zixibacteria, Bacteria

Not on your lists

comp(20351..20947)
DNA (597bp) protein (199aa)
Benzoyl-CoA reductase, gamma subunit bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Benzoyl-CoA reductase, gamma subunit {ECO:0000313|EMBL:EQB63315.1}; species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
benzoyl-CoA reductase, bzd-type, N subunit
PLM4_90_coex_sep16_scaffold_497_26

Not on your lists

comp(20944..21462)
DNA (519bp) protein (173aa)
Marine sediment metagenome DNA, contig: S01H4_S15314 {ECO:0000313|EMBL:GAH17229.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Benzoyl-CoA reductase, gamma subunit bin=GWA2_Ignavibacteria-rel_35_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
benzoyl-CoA reductase, bzd-type, N subunit
PLM4_90_coex_sep16_scaffold_497_27
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(21469..21966)
DNA (498bp) protein (166aa)
GCN5-related N-acetyltransferase Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QMB3_DESB2
N-acetyltransferase GCN5
Tax=RBG_16_Euryarchaeota_68_12_curated
Displaying 27 items

View Taxonomy