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14_0929_02_30cm_scaffold_447

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Displaying items 1-30 of 38 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
14_0929_02_30cm_scaffold_447_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1..1368
DNA (1368bp) protein (456aa)
Response regulator id=4232767 bin=GWC2_Methylomirabilis_70_16 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
sigma-54 dependent transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_02_30cm_scaffold_447_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1582..2574)
DNA (993bp) protein (331aa)
hypothetical protein id=14626378 bin=bin7_NC10_sister species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_02_30cm_scaffold_447_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2556..3185)
DNA (630bp) protein (210aa)
pmtA; phosphatidylethanolamine N-methyltransferase (EC:2.1.1.17)
Similar to phosphatidylethanolamine N-methyltransferase id=4866643 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_02_30cm_scaffold_447_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3322..4692)
DNA (1371bp) protein (457aa)
Phosphoesterase, RecJ domain protein id=4139262 bin=GWF2_Methylomirabilis_70_14 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
14_0929_02_30cm_scaffold_447_5
unknown

Not on your lists

comp(4886..5059)
DNA (174bp) protein (58aa)

This feature has no annotations

14_0929_02_30cm_scaffold_447_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(5178..7400)
DNA (2223bp) protein (741aa)
alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) id=4183572 bin=GWF2_Methylomirabilis_70_14 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
14_0929_02_30cm_scaffold_447_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7405..8604)
DNA (1200bp) protein (400aa)
apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Phosphoglyceromutase) (BPG-independent PGAM) (aPGAM) (EC:5.4.2.1)
Putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Phosphoglyceromutase) (BPG-independent PGAM) (APGAM) id=3020272 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_02_30cm_scaffold_447_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8627..9532)
DNA (906bp) protein (302aa)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase id=3020269 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Verminephrobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_02_30cm_scaffold_447_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9689..10108
DNA (420bp) protein (140aa)
Putative uncharacterized protein id=3020266 bin=GWF2_Methylomirabilis_70_14 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
14_0929_02_30cm_scaffold_447_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10108..10446
DNA (339bp) protein (113aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_02_30cm_scaffold_447_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10654..11046)
DNA (393bp) protein (131aa)
id=3020265 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_02_30cm_scaffold_447_12
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11151..12488
DNA (1338bp) protein (446aa)
Extracellular solute-binding protein family 1 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAW9_ANADF
extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ABS25865.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
14_0929_02_30cm_scaffold_447_13
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12485..13468
DNA (984bp) protein (328aa)
ABC transporter permease n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI0003683B0D
ABC transporter permease
ABC transport system permease protein y4oQ {ECO:0000313|EMBL:AEI75620.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
14_0929_02_30cm_scaffold_447_14
CSP1_5_NC10, NC10, Bacteria

Not on your lists

13473..14342
DNA (870bp) protein (290aa)
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein id=14430377 bin=bin3_NC10 species=Nitrobacter hamburgensis genus=Nitrobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
binding-protein-dependent transporters inner membrane component
Tax=CSP1_5_NC10
14_0929_02_30cm_scaffold_447_15
unknown

Not on your lists

comp(14466..14924)
DNA (459bp) protein (153aa)

This feature has no annotations

14_0929_02_30cm_scaffold_447_16
unknown

Not on your lists

15005..16039
DNA (1035bp) protein (345aa)

This feature has no annotations

14_0929_02_30cm_scaffold_447_17
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16082..16954)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DJW1_BRAJP
hypothetical protein
Putative sugar uptake ABC transporter permease protein {ECO:0000313|EMBL:AHY51274.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
14_0929_02_30cm_scaffold_447_18
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16951..17811)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D8V1_BRAJP
hypothetical protein
Bradyrhizobium elkanii strain UASWS1015 Contig185, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44906.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
14_0929_02_30cm_scaffold_447_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(17838..18929)
DNA (1092bp) protein (364aa)
Putative sugar transporter subunit: ATP-binding component of ABC superfamily transporter id=2930701 bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium sp. STM 3843 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycerol-3-phosphate ABC transporter ATP-binding protein
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_02_30cm_scaffold_447_20
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(18985..19836)
DNA (852bp) protein (284aa)
Probable sugar ABC transporter, permease protein id=3709050 bin=GWC2_Methylomirabilis_70_24 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
14_0929_02_30cm_scaffold_447_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(19837..20799)
DNA (963bp) protein (321aa)
Putative uncharacterized protein id=3709051 bin=GWC2_Methylomirabilis_70_24 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
14_0929_02_30cm_scaffold_447_22
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(20802..22106)
DNA (1305bp) protein (435aa)
Putative sugar uptake ABC transporter periplasmic solute-binding protein id=2228895 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
14_0929_02_30cm_scaffold_447_23
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(22111..23403)
DNA (1293bp) protein (431aa)
Putative sugar uptake ABC transporter periplasmic solute-binding protein id=2228895 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_02_30cm_scaffold_447_24
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(23429..24733)
DNA (1305bp) protein (435aa)
Putative sugar uptake ABC transporter periplasmic solute-binding protein id=2228895 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
14_0929_02_30cm_scaffold_447_25
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(24915..26135)
DNA (1221bp) protein (407aa)
Uncharacterized protein id=3020051 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_02_30cm_scaffold_447_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

26165..27199
DNA (1035bp) protein (345aa)
Putative integral membrane protein id=3020048 bin=GWF2_Methylomirabilis_70_14 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
integral membrane protein
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_02_30cm_scaffold_447_27
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(27196..28449)
DNA (1254bp) protein (418aa)
Major facilitator superfamily MFS_1 id=2228940 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major facilitator superfamily protein
Tax=GWA2_Rokubacteria_73_35_curated
14_0929_02_30cm_scaffold_447_28
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(28446..29180)
DNA (735bp) protein (245aa)
kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38); K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] id=14627264 bin=bin7_NC10_sister species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
3-deoxy-D-manno-octulosonate cytidylyltransferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_02_30cm_scaffold_447_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(29177..30175)
DNA (999bp) protein (333aa)
coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase id=14627263 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
luciferase family protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
14_0929_02_30cm_scaffold_447_30
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

30254..31555
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Bacillus clausii (strain KSM-K16) RepID=Q5WCQ0_BACSK
S-adenosylhomocysteine deaminase {ECO:0000313|EMBL:AJY73396.1}; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
hypothetical protein
Displaying items 1-30 of 38 in total

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