ggKbase home page

PW_scaffold_185

Alias: PW_Methanogen_55_643_21

Search features with annotation key words

Displaying 21 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PW_scaffold_185_1

Not on your lists

85..987
DNA (903bp) protein (301aa)
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39211.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
radical SAM domain-containing protein
Putative uncharacterized protein
PW_scaffold_185_2
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1064..2119)
DNA (1056bp) protein (352aa)
Tetrahedral aminopeptidase {ECO:0000313|EMBL:AKB24174.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcin
Tetrahedral aminopeptidase
Cellulase
PW_scaffold_185_3
unknown

Not on your lists

2296..2619
DNA (324bp) protein (108aa)
PW_scaffold_185_4
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

2907..3404
DNA (498bp) protein (166aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
Uncharacterized protein
PW_scaffold_185_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

3401..3880
DNA (480bp) protein (160aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
DUF2240 family protein
PW_scaffold_185_6
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3860..4921)
DNA (1062bp) protein (354aa)
metalloenzyme domain-containing protein
Metalloenzyme domain protein {ECO:0000313|EMBL:ABK14772.1}; Flags: Precursor;; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" sourc
Metalloenzyme domain protein
PW_scaffold_185_7
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5003..5515)
DNA (513bp) protein (171aa)
Uncharacterized protein {ECO:0000313|EMBL:EFW90584.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
putative KEOPS complex component
Putative uncharacterized protein
PW_scaffold_185_8
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


5596..6105
DNA (510bp) protein (170aa)
rpl10e; 50S ribosomal protein L10e
50S ribosomal protein L10e {ECO:0000256|HAMAP-Rule:MF_00448, ECO:0000256|SAAS:SAAS00015362}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methano
50S ribosomal protein L10e
PW_scaffold_185_9
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6115..6720
DNA (606bp) protein (202aa)
Translation initiation factor 2 subunit beta {ECO:0000256|HAMAP-Rule:MF_00232}; aIF2-beta {ECO:0000256|HAMAP-Rule:MF_00232}; eIF-2-beta {ECO:0000256|HAMAP-Rule:MF_00232}; TaxID=1434118 species="Archae
Eukaryotic translation initiation factor 2 beta subunit
Translation initiation factor 2 subunit beta
PW_scaffold_185_10
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6748..7107)
DNA (360bp) protein (120aa)
hypothetical protein
Uncharacterized protein conserved in archaea {ECO:0000313|EMBL:AFD00066.1}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="M
Uncharacterized protein conserved in archaea
PW_scaffold_185_11
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7229..7813
DNA (585bp) protein (195aa)
putative Cro-like protein
Putative Cro-like protein {ECO:0000313|EMBL:AKB55427.1}; TaxID=1434108 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina
Transcriptional regulator, XRE family
PW_scaffold_185_12
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7818..8948
DNA (1131bp) protein (377aa)
Serine--glyoxylate aminotransferase {ECO:0000313|EMBL:AKB24556.1}; EC=2.6.1.45 {ECO:0000313|EMBL:AKB24556.1};; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methan
phosphoserine aminotransferase / L-aspartate aminotransferase
Phosphoserine aminotransferase / L-aspartate aminotransferase
PW_scaffold_185_13
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8957..9652
DNA (696bp) protein (232aa)
radB; DNA repair and recombination protein RadB
DNA repair and recombination protein RadB {ECO:0000256|HAMAP-Rule:MF_00350}; TaxID=1434121 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" so
DNA repair and recombination protein RadB
PW_scaffold_185_14
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9655..10692
DNA (1038bp) protein (346aa)
tRNA-(G10-N2) methyltransferase {ECO:0000313|EMBL:AKB15614.1}; TaxID=1434121 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanos
trmL; N2-methylguanosine tRNA methyltransferase
N2-methylguanosine tRNA methyltransferase
PW_scaffold_185_15
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10697..11407
DNA (711bp) protein (237aa)
UPF0280 protein MSMTP_1935 {ECO:0000256|HAMAP-Rule:MF_01079}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosa
hypothetical protein
UPF0280 protein Mzhil_0896
PW_scaffold_185_16
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11409..12236
DNA (828bp) protein (276aa)
dapF; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=990316 species="Archaea; Eurya
Diaminopimelate epimerase
PW_scaffold_185_17
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12285..14135)
DNA (1851bp) protein (617aa)
NhaP-type Na+(K+)/H+ antiporter {ECO:0000313|EMBL:ETA68590.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolob
sodium/hydrogen exchanger
Sodium/hydrogen antiporter
PW_scaffold_185_18
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists

14453..15529
DNA (1077bp) protein (359aa)
arsenical-resistance protein; K03325 arsenite transporter, ACR3 family Tax=RBG_13_Chloroflexi_51_36_curated
arsenical-resistance protein
aar:Acear_2029 arsenical-resistance protein; K03325 arsenite transporter, ACR3 family alias=scaffold_7_112,RBG2_C00007G00112 id=1242308 tax=RBG2 species=Methanolinea tarda genus=Methanolinea taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota
PW_scaffold_185_19
Desulfurivibrio alkaliphilus, Desulfurivibrio, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15589..15903
DNA (315bp) protein (105aa)
Uncharacterized protein {ECO:0000313|EMBL:ADH85718.1}; TaxID=589865 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfurivibrio.;" source="Desulfurivib
Putative uncharacterized protein
PW_scaffold_185_20
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(15905..16465)
DNA (561bp) protein (187aa)
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AGN27007.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccu
Uncharacterized protein
PW_scaffold_185_21
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

Not on your lists

comp(16484..18040)
DNA (1557bp) protein (519aa)
ATPase AAA (EC:3.6.4.3 3.6.1.3)
AAA family ATPase, CDC48 subfamily {ECO:0000313|EMBL:EDY37099.1}; EC=3.6.1.3 {ECO:0000313|EMBL:ADD08216.1};; EC=3.6.4.3 {ECO:0000313|EMBL:ADD08216.1};; TaxID=439481 species="Archaea; Euryarchaeota; Ac
AAA family ATPase, CDC48 subfamily
Displaying 21 items

View Taxonomy