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PW_scaffold_188

Alias: PW_Methanogen_55_643_22

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PW_scaffold_188_1
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3..1190
DNA (1188bp) protein (396aa)
S-layer family duplication domain protein {ECO:0000313|EMBL:AKB26662.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source
S-layer-like domain-containing protein
DUF1608 containing protein
PW_scaffold_188_2
Methanosarcina sp. 1.H.A.2.2, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(1165..2001)
DNA (837bp) protein (279aa)
16S rRNA methyltransferase {ECO:0000313|EMBL:KKH48943.1}; TaxID=1483601 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcin
ksgA; dimethyladenosine transferase
Probable ribosomal RNA small subunit methyltransferase A
PW_scaffold_188_3
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2002..2574)
DNA (573bp) protein (191aa)
Putative RNA-binding protein {ECO:0000313|EMBL:ETA67056.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus
putative RNA-binding protein
Putative RNA-binding protein
PW_scaffold_188_4
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2632..2997)
DNA (366bp) protein (122aa)
Uncharacterized protein conserved in archaea {ECO:0000313|EMBL:ETA67055.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ETA67055.1};; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales
DNA-directed RNA polymerase, subunit F (EC:2.7.7.6)
DNA-directed RNA polymerase, subunit F
PW_scaffold_188_5
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3020..3310)
DNA (291bp) protein (97aa)
rpl21e; 50S ribosomal protein L21
50S ribosomal protein L21e
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
PW_scaffold_188_6
Methanohalophilus mahii, Methanohalophilus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3393..4847)
DNA (1455bp) protein (485aa)
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
Amidophosphoribosyltransferase
PW_scaffold_188_7
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5040..5255)
DNA (216bp) protein (72aa)
small nuclear ribonucleoprotein
Putative snRNP Sm-like protein {ECO:0000256|HAMAP-Rule:MF_00257}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="
Putative snRNP Sm-like protein
PW_scaffold_188_8
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


5355..5840
DNA (486bp) protein (162aa)
Putative RNA-binding protein {ECO:0000313|EMBL:EJN59487.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
RNA-binding protein
Putative RNA-binding protein
PW_scaffold_188_9
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5820..6611)
DNA (792bp) protein (264aa)
cytidine deaminase
Cytidine deaminase {ECO:0000313|EMBL:AEB69675.1}; TaxID=990316 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta concilii (str
Cytidine deaminase
PW_scaffold_188_10
unknown

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7430..7855
DNA (426bp) protein (142aa)
PW_scaffold_188_11
unknown

Not on your lists

8033..8236
DNA (204bp) protein (68aa)
PW_scaffold_188_12
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

8654..9481
DNA (828bp) protein (276aa)
Pyrrolysyl-tRNA synthetase rbh
Pyrrolysyl-tRNA synthetase {ECO:0000313|EMBL:AGN26252.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" sou
Pyrrolysyl-tRNA synthetase
PW_scaffold_188_13
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

9495..10586
DNA (1092bp) protein (364aa)
biotin synthase
Methylornithine Synthase {ECO:0000313|EMBL:AGN26251.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" sourc
Biotin synthase
PW_scaffold_188_14
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

10583..11794
DNA (1212bp) protein (404aa)
Pyrrolysine synthetase rbh
3-methylornithine--L-lysine ligase {ECO:0000313|EMBL:AGN26250.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccu
Putative uncharacterized protein
PW_scaffold_188_15
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

11781..12593
DNA (813bp) protein (271aa)
hypothetical protein
3-methylornithyl-N6-L-lysine dehydrogenase {ECO:0000313|EMBL:AGN26249.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassi
Uncharacterized protein
PW_scaffold_188_16
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13106..14107
DNA (1002bp) protein (334aa)
Trimethylamine:corrinoid methyltransferase {ECO:0000313|EMBL:AKB26019.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" sourc
mttB; trimethylamine:corrinoid methyltransferase
Trimethylamine methyltransferase
PW_scaffold_188_17
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14135..14593
DNA (459bp) protein (153aa)
Trimethylamine:corrinoid methyltransferase
Trimethylamine:corrinoid methyltransferase {ECO:0000313|EMBL:AKB42747.1}; TaxID=1434123 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" sourc
Trimethylamine methyltransferase MttB1
PW_scaffold_188_18
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14610..15281
DNA (672bp) protein (224aa)
Dimethylamine corrinoid protein 3 {ECO:0000313|EMBL:KKG79031.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosa
Trimethylamine methyltransferase corrinoid protein
Trimethylamine corrinoid protein 1
PW_scaffold_188_19

Not on your lists

15323..16390
DNA (1068bp) protein (356aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN26883.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transmembrane protein MttP
Putative uncharacterized protein
PW_scaffold_188_20
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16403..16711
DNA (309bp) protein (103aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB48328.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanometh
Uncharacterized protein
PW_scaffold_188_21
unknown

Not on your lists

16724..16864
DNA (141bp) protein (47aa)
PW_scaffold_188_22
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16915..17835
DNA (921bp) protein (307aa)
Monomethylamine methyltransferase MtmB
Monomethylamine methyltransferase MtmB {ECO:0000313|EMBL:AEH60202.1}; TaxID=679901 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosalsum.;" source="Met
Monomethylamine methyltransferase MtmB
Displaying 22 items

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