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QC1_scaffold_531

Search features with annotation key words

Displaying items 1-30 of 47 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
QC1_scaffold_531_1
unknown

Not on your lists

3..77
DNA (75bp) protein (25aa)

This feature has no annotations

QC1_scaffold_531_2
unknown

Not on your lists

74..556
DNA (483bp) protein (161aa)

This feature has no annotations

QC1_scaffold_531_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

686..2407
DNA (1722bp) protein (574aa)
DNA polymerase X family (EC:2.7.7.7)
PHP domain protein bin=GWA1_ZB2_49_26 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
QC1_scaffold_531_4
R_OD1_48_18, Parcubacteria, Bacteria

Not on your lists

2404..3234
DNA (831bp) protein (277aa)
methylenetetrahydrofolate dehydrogenase (NADP(+)) (EC:1.5.1.5)
Bifunctional protein FolD bin=GWF2_Firmicute_51_9 species=Thiovulum sp. ES genus=Thiovulum taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWF2_Firmicute_51_9 organism_group=Firmicute
Tax=RIFCSPLOWO2_01_FULL_OD1_48_18_curated
QC1_scaffold_531_trna_1
unknown

Not on your lists

3234..3304
DNA (71bp)
transferRNA Ala
QC1_scaffold_531_trna_5
unknown

Not on your lists

comp(3315..3387)
DNA (73bp)
transferRNA Arg
QC1_scaffold_531_trna_4
unknown

Not on your lists

comp(3389..3461)
DNA (73bp)
transferRNA Met
QC1_scaffold_531_5
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists

comp(3478..4137)
DNA (660bp) protein (220aa)
tRNA (Guanine-N(1)-)-methyltransferase {ECO:0000313|EMBL:KKS18838.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
tRNA (guanine-N(1)-)-methyltransferase bin=GWC1_OD1_38_17 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
trmD; tRNA (guanine-N(1)-)-methyltransferase
QC1_scaffold_531_6
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists

comp(4134..4460)
DNA (327bp) protein (109aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000369925F
Uncharacterized protein {ECO:0000313|EMBL:KKS18839.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
hypothetical protein
QC1_scaffold_531_7
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists

comp(4517..6076)
DNA (1560bp) protein (520aa)
Putative uncharacterized protein Tax=candidate division TM7 genomosp. GTL1 RepID=A5KT03_9BACT bin=ACD58 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Uncharacterized protein {ECO:0000313|EMBL:KKS18840.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
QC1_scaffold_531_8
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists


comp(6069..7349)
DNA (1281bp) protein (427aa)
Alanyl-tRNA synthetase (EC:6.1.1.7)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI0003805103
Alanine-tRNA ligase {ECO:0000313|EMBL:KKS18841.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
QC1_scaffold_531_9
GWD2_OD1_39_48_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(7342..8826)
DNA (1485bp) protein (495aa)
lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R8W1_AMMDK
Lysine-tRNA ligase {ECO:0000313|EMBL:KKR22651.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWD2_39_48.;"
QC1_scaffold_531_10
GWB1_OD1_47_6, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(8873..10111)
DNA (1239bp) protein (413aa)
Mannose-sensitive agglutinin (MSHA) biogenesis protein MshG (Pilus type IV) Tax=uncultured bacterium RepID=K2F841_9BACT
Type 4 fimbrial assembly protein pilC {ECO:0000313|EMBL:KKU77392.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_47_6b.;"
type II secretion system F domain
QC1_scaffold_531_11
RIFOXYD12_FULL_OD1_Wolfebacteria_48_21_curated, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(10108..11814)
DNA (1707bp) protein (569aa)
ace:Acel_1322 type II secretion system protein E; K02652 type IV pilus assembly protein PilB bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
type IV-A pilus assembly ATPase PilB
Tax=RIFOXYD12_FULL_OD1_Wolfebacteria_48_21_curated
QC1_scaffold_531_12
GWF2_OD1_46_32, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(11811..12428)
DNA (618bp) protein (206aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU36827.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWF2_46_32.;"
QC1_scaffold_531_13
unknown

Not on your lists

12431..12907
DNA (477bp) protein (159aa)

This feature has no annotations

QC1_scaffold_531_14
R_OP11_Levybacteria_41_15, Levybacteria, Microgenomates, Bacteria

Not on your lists

12954..13655
DNA (702bp) protein (234aa)
hypothetical protein Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI0003673176
DSBA oxidoreductase
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_41_15_curated
QC1_scaffold_531_15
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

13652..13900
DNA (249bp) protein (83aa)
Glutaredoxin Tax=Bacillus nealsonii AAU1 RepID=R9C4N6_9BACI
glutaredoxin-like protein
Tax=RBG_16_Micrarchaeota_49_10_curated
QC1_scaffold_531_16
R_OD1_40_30, Parcubacteria, Bacteria

Not on your lists


13904..14827
DNA (924bp) protein (308aa)
Alkyl hydroperoxide reductase, F subunit bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Ribosomal protein S9
Tax=RIFCSPHIGHO2_01_FULL_OD1_40_30_curated
QC1_scaffold_531_17
Thermus scotoductus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists


comp(14817..15182)
DNA (366bp) protein (122aa)
50S ribosomal protein L19 Tax=Thermus scotoductus (strain ATCC 700910 / SA-01) RepID=E8PJP9_THESS
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus scotoductus (strain ATCC 700910 / SA-01).;"
QC1_scaffold_531_18
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists

comp(15197..16348)
DNA (1152bp) protein (384aa)
Carboxyl-terminal protease {ECO:0000313|EMBL:KKS19313.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
Carboxyl-terminal protease bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
carboxyl-terminal protease
QC1_scaffold_531_19
unknown

Not on your lists

16377..17039
DNA (663bp) protein (221aa)

This feature has no annotations

QC1_scaffold_531_20
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists

17051..18901
DNA (1851bp) protein (617aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS19315.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
alias=gwe2_scaffold_421_39 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
QC1_scaffold_531_21
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists


18909..20246
DNA (1338bp) protein (446aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
Glycine--tRNA ligase Tax=uncultured candidate division OP1 bacterium RepID=H5SRG8_9BACT
glycyl-tRNA synthetase
QC1_scaffold_531_trna_3
unknown

Not on your lists

comp(20675..20748)
DNA (74bp)
transferRNA Val
QC1_scaffold_531_22
GWC1_OD1_41_7, Parcubacteria, Bacteria

Not on your lists

comp(20726..21115)
DNA (390bp) protein (130aa)
Response regulator receiver protein {ECO:0000313|EMBL:KKS19138.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_41_7.;"
hypothetical protein bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
response regulator receiver protein
QC1_scaffold_531_16S_1
unknown

Not on your lists

comp(21217..22734)
DNA (1518bp)
16S ribosomal RNA (16S rRNA)
QC1_scaffold_531_23
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(22884..23300)
DNA (417bp) protein (139aa)
Tax=CG_OP9-01
QC1_scaffold_531_24
GWA1_OD1_Wolfebacteria_42_9_curated, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists


comp(23297..24715)
DNA (1419bp) protein (473aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036D2186
Tax=GWA1_OD1_Wolfebacteria_42_9_curated
QC1_scaffold_531_25
RHI_RIF_OD1_07_40_12, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(24751..25929)
DNA (1179bp) protein (393aa)
Cell division protein ftsA Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AAF4_CARHZ
ftsA; cell division protein FtsA
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_07_40_12_curated
Displaying items 1-30 of 47 in total

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