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QC4_scaffold_1380

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
QC4_scaffold_1380_1
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(116..589)
DNA (474bp) protein (158aa)
Uncharacterized conserved protein Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8D1I9_HALOH
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:ACL69066.1}; species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562).;"
QC4_scaffold_1380_2
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(606..1628)
DNA (1023bp) protein (341aa)
Hydrogenase expression/formation protein HypE bin=GWC2_Planctomycete_KSU_39_26 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
hydrogenase expression/formation protein HypE
Tax=RBG_16_Zixibacteria_43_9_curated
QC4_scaffold_1380_3
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(1630..2769)
DNA (1140bp) protein (380aa)
Hydrogenase expression/formation protein HypD Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TG56_9CLOT
hydrogenase expression/formation protein HypD
Tax=CG_Elusi_05
QC4_scaffold_1380_4
Palaeococcus pacificus, Palaeococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(2775..2990)
DNA (216bp) protein (72aa)
Hydrogenase assembly chaperone HypC/HupF Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CL89_9FIRM
hydrogenase
Hydrogenase {ECO:0000313|EMBL:AIF69656.1}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus.;" source="Palaeococcus pacificus DY20341.;"
QC4_scaffold_1380_5
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

3067..4377
DNA (1311bp) protein (437aa)
Adenylosuccinate synthetase Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=PURA_UNCTG
adenylosuccinate synthetase
Tax=CG_Elusi_05
QC4_scaffold_1380_6
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

4374..6557
DNA (2184bp) protein (728aa)
Multi-sensor signal transduction histidine kinase bin=GWB2_Elusimicrobium_63_22 species=Natranaerobius thermophilus genus=Natranaerobius taxon_order=Natranaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
multi-sensor signal transduction histidine kinase
Tax=CG_Elusi_05
QC4_scaffold_1380_7
RIFOXYB2_FULL_Elusimicrobia_48_7_curated, Elusimicrobia, Bacteria

Not on your lists

6554..8146
DNA (1593bp) protein (531aa)
Sigma factor regulatory protein, FecR/PupR family bin=GWA2_Elusi_like_61_42 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
FecR family protein
Tax=RIFOXYB2_FULL_Elusimicrobia_48_7_curated
QC4_scaffold_1380_trna_1
unknown

Not on your lists

comp(9182..9254)
DNA (73bp)
transferRNA Lys
QC4_scaffold_1380_8
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

Not on your lists

comp(9355..10293)
DNA (939bp) protein (313aa)
beta-lactamase Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B46AE8
beta-lactamase domain protein
Tax=BJP_IG2102_Elusimicrobia_52_42
QC4_scaffold_1380_9
unknown

Not on your lists

comp(10293..11363)
DNA (1071bp) protein (357aa)

This feature has no annotations

QC4_scaffold_1380_10
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11381..11575)
DNA (195bp) protein (65aa)
FHA domain/GGDEF domain-containing protein Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MWV8_CORCM
FHA domain/GGDEF domain protein {ECO:0000313|EMBL:KFE67769.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
yhcK; FHA domain/GGDEF domain-containing protein
QC4_scaffold_1380_11
CG_Elusi_03, Elusimicrobia, Bacteria

Not on your lists

comp(11526..12068)
DNA (543bp) protein (181aa)
GGDEF family protein Tax=Vibrio vulnificus (strain YJ016) RepID=Q7MKQ3_VIBVY
diguanylate cyclase
Tax=CG_Elusi_03
QC4_scaffold_1380_12
unknown

Not on your lists

comp(12085..12612)
DNA (528bp) protein (176aa)

This feature has no annotations

QC4_scaffold_1380_13
RIFOXYA2_FULL_Elusimicrobia_47_53_curated, Elusimicrobia, Bacteria

Not on your lists

comp(12613..13983)
DNA (1371bp) protein (457aa)
Ggdef domain Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YAI6_DICT6
ggdef domain
Tax=RIFOXYA2_FULL_Elusimicrobia_47_53_curated
QC4_scaffold_1380_14
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

14256..15731
DNA (1476bp) protein (492aa)
Arginine decarboxylase Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1H0G3_UNCTG
arginine decarboxylase
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_1380_15
RIFOXYB2_FULL_Elusimicrobia_48_7_curated, Elusimicrobia, Bacteria

Not on your lists

15793..16266
DNA (474bp) protein (158aa)
DnaK suppressor protein Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KE71_ELUMP
DnaK suppressor protein
Tax=RIFOXYB2_FULL_Elusimicrobia_48_7_curated
QC4_scaffold_1380_16
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

16409..18196
DNA (1788bp) protein (596aa)
ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YEY9_DICT6
Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
QC4_scaffold_1380_17
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

18281..18778
DNA (498bp) protein (166aa)
Ribonucleoside-diphosphate reductase bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
cobalamin-dependent ribonucleotide reductase alpha subunit
Tax=CG_Elusi_05
QC4_scaffold_1380_18
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

18825..19376
DNA (552bp) protein (184aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Deoxycytidine triphosphate deaminase Tax=Pseudomonas mendocina RepID=DCD_PSEMY
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
QC4_scaffold_1380_19
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

19445..20605
DNA (1161bp) protein (387aa)
IMP dehydrogenase family protein bin=GWA2_Elusimicrobia_66_18 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
guaB; IMP dehydrogenase/GMP reductase
Tax=CG_Elusi_05
QC4_scaffold_1380_20
RIFOXYB2_FULL_Elusimicrobia_49_7_curated, Elusimicrobia, Bacteria

Not on your lists

20609..22168
DNA (1560bp) protein (520aa)
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YHY9_THEYD
Tax=RIFOXYB2_FULL_Elusimicrobia_49_7_curated
QC4_scaffold_1380_21
CG_Elusi_03, Elusimicrobia, Bacteria

Not on your lists

22190..23176
DNA (987bp) protein (329aa)
Phosphate transporter bin=GWF2_Lentisphaerae_57_35 species=Archaeoglobus profundus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Na-dependent transporter
Tax=CG_Elusi_03
Displaying 22 items

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