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QC4_scaffold_3955

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
QC4_scaffold_3955_1
unknown

Not on your lists

comp(3..92)
DNA (90bp) protein (30aa)

This feature has no annotations

QC4_scaffold_3955_2
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(162..1238)
DNA (1077bp) protein (359aa)
Twitching motility protein bin=GWA2_Elusimicrobia_66_18 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
pilT-1; twitching motility pilus retraction protein
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_3955_3
unknown

Not on your lists

comp(1264..1596)
DNA (333bp) protein (111aa)

This feature has no annotations

QC4_scaffold_3955_4
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

Not on your lists

comp(1627..1926)
DNA (300bp) protein (100aa)
Microcompartments protein bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Synergistetes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
carbon dioxide concentrating mechanism/carboxysome shell protein
Tax=BJP_IG2102_Elusimicrobia_52_42
QC4_scaffold_3955_5

Not on your lists

comp(2146..3579)
DNA (1434bp) protein (478aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN15759.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Response receiver sensor diguanylate cyclase bin=GWF2_Nitrospirae_44_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
diguanylate cyclase
QC4_scaffold_3955_6
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

Not on your lists

comp(3598..5076)
DNA (1479bp) protein (493aa)
Deoxyribose-phosphate aldolase bin=GWA2_Elusimicrobia_51_34 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
dra; deoxyribose-phosphate aldolase
Tax=BJP_IG2102_Elusimicrobia_52_42
QC4_scaffold_3955_7
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

Not on your lists

comp(5113..5421)
DNA (309bp) protein (103aa)
Putative carbon dioxide concentrating mechanism protein CcmL bin=GWA2_Elusimicrobia_66_18 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
ethanolamine utilization protein EutN/carboxysome structural protein Ccml
Tax=BJP_IG2102_Elusimicrobia_52_42
QC4_scaffold_3955_8
R_Elusimicrobia_60_11, Elusimicrobia, Bacteria

Not on your lists

comp(5435..5719)
DNA (285bp) protein (95aa)
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml bin=GWA2_Elusimicrobia_69_24 species=Pseudoflavonifractor capillosus genus=Pseudoflavonifractor taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
ethanolamine utilization protein EutN/carboxysome structural protein Ccml
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_60_11_curated
QC4_scaffold_3955_9
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(5723..6292)
DNA (570bp) protein (190aa)
Putative uncharacterized protein bin=GWC2_Elusimicrobia_51_8 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
QC4_scaffold_3955_10
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(6289..6717)
DNA (429bp) protein (143aa)
Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
QC4_scaffold_3955_11
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(6740..7207)
DNA (468bp) protein (156aa)
Ribose-5-phosphate isomerase B Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GZW4_UNCTG
ribose-5-phosphate isomerase B
Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
QC4_scaffold_3955_12
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(7222..7674)
DNA (453bp) protein (151aa)
ywlF1; putative sugar phosphate isomerase YwlF (EC:5.3.1.-)
Sugar-phosphate isomerase, RpiB/LacA/LacB family bin=GWC2_Elusimicrobia_64_44 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
QC4_scaffold_3955_13
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

Not on your lists

comp(7703..8260)
DNA (558bp) protein (186aa)
Microcompartments protein Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TJY2_ALKMQ
microcompartments protein
Tax=BJP_IG2102_Elusimicrobia_52_42
QC4_scaffold_3955_14
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

Not on your lists

comp(8268..9587)
DNA (1320bp) protein (440aa)
Ethanolamine utilization Fe-S center protein eut Tax=Eubacterium limosum (strain KIST612) RepID=E3GH58_EUBLK
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit
Tax=BJP_IG2102_Elusimicrobia_52_42
QC4_scaffold_3955_15
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

Not on your lists

comp(9600..11036)
DNA (1437bp) protein (479aa)
acetaldehyde dehydrogenase (EC:1.2.1.10)
Putative aldehyde dehydrogenase, ethanolamine utilization protein bin=GWA2_Elusimicrobia_69_24 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=BJP_IG2102_Elusimicrobia_52_42
QC4_scaffold_3955_16
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(11083..11400)
DNA (318bp) protein (106aa)
Ethanolamine utilization protein EutN bin=GWB2_Elusimicrobium_63_22 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
eutN; ethanolamine utilization protein EutN
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
QC4_scaffold_3955_17
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

comp(11444..11752)
DNA (309bp) protein (103aa)
Microcompartments protein bin=GWA2_Elusimicrobia_69_24 species=Marinobacter hydrocarbonoclasticus genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
carboxysome structural protein EutM
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
QC4_scaffold_3955_18

Not on your lists

comp(11767..12081)
DNA (315bp) protein (105aa)
paREP15 coiled-coil protein Tax=Hippea alviniae RepID=UPI0003B60835
Marine sediment metagenome DNA, contig: S01H4_L00314 {ECO:0000313|EMBL:GAG57207.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Displaying 18 items

View Taxonomy