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QC4_scaffold_2929

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
QC4_scaffold_2929_16S_1
unknown

Not on your lists

comp(6..765)
DNA (760bp)
16S ribosomal RNA (16S rRNA)
QC4_scaffold_2929_1
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1342..2019
DNA (678bp) protein (226aa)
deoxyribonuclease V (EC:3.1.21.7)
Endonuclease V Tax=Roseiflexus sp. (strain RS-1) RepID=NFI_ROSS1
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
QC4_scaffold_2929_trna_1
unknown

Not on your lists

comp(2018..2089)
DNA (72bp)
transferRNA Gly
QC4_scaffold_2929_2
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

Not on your lists

comp(2122..2775)
DNA (654bp) protein (218aa)
Putative uncharacterized protein bin=GWA2_Elusi-like_A8_64_40 species=Selenomonas infelix genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Elusi-like_A8_64_40 organism_group=Elusimicrobia
OmpA/MotB domain-containing protein
Tax=BJP_IG2102_Elusimicrobia_52_42
QC4_scaffold_2929_3
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(2788..3654)
DNA (867bp) protein (289aa)
MotA/TolQ/ExbB proton channel bin=GWA2_Elusimicrobia_51_34 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
MotA/TolQ/ExbB proton channel
Tax=CG_Elusi_05
QC4_scaffold_2929_4
GWC2_Elusimicrobia_56_31_curated, Elusimicrobia, Bacteria

Not on your lists

comp(3667..3894)
DNA (228bp) protein (76aa)
Flagellar FlbD family protein bin=GWA2_Elusimicrobia_56_46 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
flagellar FlbD family protein
Tax=GWC2_Elusimicrobia_56_31_curated
QC4_scaffold_2929_5
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4612..5907)
DNA (1296bp) protein (432aa)
Putative cytosine deaminase Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P964_9FIRM
Putative cytosine deaminase {ECO:0000313|EMBL:EDS11932.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
amidohydrolase
QC4_scaffold_2929_6
RIFOXYB2_FULL_Elusimicrobia_49_7_curated, Elusimicrobia, Bacteria

Not on your lists

comp(6159..7385)
DNA (1227bp) protein (409aa)
Type II secretion system protein bin=GWA2_Elusimicrobia_69_24 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Type II secretion system F domain protein
Tax=RIFOXYB2_FULL_Elusimicrobia_49_7_curated
QC4_scaffold_2929_7
CG_Omnitr_04, Omnitrophica, Bacteria

Not on your lists

comp(7392..7991)
DNA (600bp) protein (200aa)
Putative uncharacterized protein (Fragment) Tax=sediment metagenome RepID=D9PHA1_9ZZZZ
hypothetical protein
Tax=CG_Omnitr_04
QC4_scaffold_2929_8
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(8050..8232)
DNA (183bp) protein (61aa)
hypothetical protein bin=GWA2_Elusimicrobia_66_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_2929_9
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(8361..9431)
DNA (1071bp) protein (357aa)
Diguanylate cyclase with GAF sensor Tax=uncultured bacterium RepID=K2B5Q4_9BACT
GAF sensor-containing diguanylate cyclase
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
QC4_scaffold_2929_10
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

Not on your lists

comp(9651..10907)
DNA (1257bp) protein (419aa)
Nucleoside transporter, NupC family bin=GWB2_Elusimicrobium_63_22 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
NupC family nucleoside transporter
Tax=BJP_IG2102_Elusimicrobia_52_42
QC4_scaffold_2929_11
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

11359..12123
DNA (765bp) protein (255aa)
Putative uncharacterized protein Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KP98_ARCVS
Uncharacterized conserved protein {ECO:0000313|EMBL:GAN32064.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
hypothetical protein
QC4_scaffold_2929_12
Thermoanaerobacter sp. YS13, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12128..12661)
DNA (534bp) protein (178aa)
fumA; fumarate hydratase subunit beta (EC:4.2.1.2)
Fumarate hydratase {ECO:0000313|EMBL:KHO61514.1}; EC=4.2.1.2 {ECO:0000313|EMBL:KHO61514.1};; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter sp. YS13.;"
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit Tax=Thermoanaerobacter RepID=G2MUS4_9THEO
QC4_scaffold_2929_13
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(12658..13497)
DNA (840bp) protein (280aa)
Fumarate hydratase alpha subunit Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GZT9_UNCTG
fumarate hydratase alpha subunit
Tax=RBG_13_OP8X_37_8_curated
QC4_scaffold_2929_14
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

Not on your lists

comp(13494..14627)
DNA (1134bp) protein (378aa)
Putative uncharacterized protein bin=GWA2_Elusimicrobia_56_46 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
Tax=BJP_IG2102_Elusimicrobia_52_42
Displaying 16 items

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