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qh_1_scaffold_1289

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_1289_1
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2..889
DNA (888bp) protein (296aa)
alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DB04_9EURY
Alpha-L-fucosidase {ECO:0000313|EMBL:ELZ32631.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14
qh_1_scaffold_1289_2
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(944..1936)
DNA (993bp) protein (331aa)
Aldo/keto reductase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DD19_9EURY
Aldo/keto reductase {ECO:0000313|EMBL:ELZ32632.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 1
aldo/keto reductase
qh_1_scaffold_1289_3
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2709..3068)
DNA (360bp) protein (120aa)
Sugar ABC transporter ATP-binding protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DAX3_9EURY
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ32635.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeom
sugar ABC transporter ATP-binding protein
qh_1_scaffold_1289_4
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3109..3588)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DB08_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ32636.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
qh_1_scaffold_1289_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3889..4350)
DNA (462bp) protein (154aa)
Amidohydrolase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DD24_9EURY
hypothetical protein
Amidohydrolase {ECO:0000313|EMBL:ELZ32637.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.
qh_1_scaffold_1289_6
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4329..4781)
DNA (453bp) protein (151aa)
Alpha-L-fucosidase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DEQ8_9EURY
Alpha-L-fucosidase {ECO:0000313|EMBL:ELZ32639.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14
putative alpha-L-fucosidase
qh_1_scaffold_1289_7
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4816..5679)
DNA (864bp) protein (288aa)
Putative fructose-amino acid permease n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DAX7_9EURY
Putative fructose-amino acid permease {ECO:0000313|EMBL:ELZ32640.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometri
binding-protein-dependent transport system inner membrane protein
qh_1_scaffold_1289_8
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5676..6623)
DNA (948bp) protein (316aa)
Putative fructose-amino acid permease n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DB13_9EURY
Putative fructose-amino acid permease {ECO:0000313|EMBL:ELZ32641.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometri
sugar ABC transporter permease
qh_1_scaffold_1289_9
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6630..8153)
DNA (1524bp) protein (508aa)
Family 1 extracellular solute-binding protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DD28_9EURY
Family 1 extracellular solute-binding protein {ECO:0000313|EMBL:ELZ32642.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halo
hypothetical protein
qh_1_scaffold_1289_10
unknown

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comp(8425..8775)
DNA (351bp) protein (117aa)

This feature has no annotations

qh_1_scaffold_1289_11
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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9224..9667
DNA (444bp) protein (148aa)
alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase {ECO:0000313|EMBL:ADY60765.1}; EC=3.2.1.51 {ECO:0000313|EMBL:ADY60765.1};; Flags: Precursor;; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planc
Alpha-L-fucosidase n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SIU1_PLABD
qh_1_scaffold_1289_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9760..10245
DNA (486bp) protein (162aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CRC1_9EURY
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ELZ24937.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Hal
mandelate racemase/muconate lactonizing protein
qh_1_scaffold_1289_13
unknown

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comp(10354..10680)
DNA (327bp) protein (109aa)

This feature has no annotations

qh_1_scaffold_1289_14
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(10966..11646)
DNA (681bp) protein (227aa)
Transcriptional regulator, IclR family n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DD74_HALXS
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:AEH38963.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensi
qh_1_scaffold_1289_15
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(11646..11900)
DNA (255bp) protein (85aa)
hypothetical protein
hypothetical protein id=24624539 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
Uncharacterized conserved protein (DUF2088) {ECO:0000313|EMBL:ERG99923.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquad
Displaying 15 items

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