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qh_1_scaffold_1327

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_1327_1
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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944..1894
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000346FFEB
TRAP dicarboxylate transporter subunit DctP
Tax=BJP_IG2102_Ignavibacteriales_35_8
qh_1_scaffold_1327_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1940..2482
DNA (543bp) protein (181aa)
Tripartite ATP-independent periplasmic transporter DctQ component n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0ME14_RHOM4
tripartite AtP-independent periplasmic transporter subunit DctQ
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:ACY49158.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
qh_1_scaffold_1327_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2525..3820
DNA (1296bp) protein (432aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJK7_RHOMR
TRAP dicarboxylate transporter subunit DctM
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:AEN74175.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" sour
qh_1_scaffold_1327_4
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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3870..4658
DNA (789bp) protein (263aa)
Oxidoreductase, short chain dehydrogenase/reductase family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JF68_9BACT
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACB77564.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain D
qh_1_scaffold_1327_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5004..6149
DNA (1146bp) protein (382aa)
galactonate dehydratase (EC:4.2.1.6)
Galactonate dehydratase {ECO:0000313|EMBL:AEN74174.1}; EC=4.2.1.6 {ECO:0000313|EMBL:AEN74174.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
Galactonate dehydratase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJK6_RHOMR
qh_1_scaffold_1327_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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6237..6920
DNA (684bp) protein (228aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJK5_RHOMR
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:AEN74173.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodo
qh_1_scaffold_1327_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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6936..7964
DNA (1029bp) protein (343aa)
PfkB domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0ME10_RHOM4
PfkB domain-containing protein
PfkB domain protein {ECO:0000313|EMBL:ACY49154.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus
qh_1_scaffold_1327_8
unknown

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comp(8434..8985)
DNA (552bp) protein (184aa)

This feature has no annotations

qh_1_scaffold_1327_9
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

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comp(9130..12879)
DNA (3750bp) protein (1250aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00036781DA
ASPIC/UnbV domain-containing protein Tax=RBG_13_Caldithrix_44_9_curated
ASPIC/UnbV domain protein
qh_1_scaffold_1327_10
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(13173..14759)
DNA (1587bp) protein (529aa)
endo-1,4-beta-xylanase (EC:3.2.1.8)
Endo-1,4-beta-xylanase, family GH5 {ECO:0000313|EMBL:CAZ97654.1}; EC=3.2.1.8 {ECO:0000313|EMBL:CAZ97654.1};; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacter
Endo-1,4-beta-xylanase, family GH5 n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L8L2_ZOBGA
qh_1_scaffold_1327_11
Bacteroides intestinalis CAG:564, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15071..15649
DNA (579bp) protein (193aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154};
lacZ; beta-galactosidase (EC:3.2.1.23)
Beta galactosidase small chain n=2 Tax=Bacteroides RepID=B3C9D4_9BACE
qh_1_scaffold_1327_12
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

15594..18182
DNA (2589bp) protein (863aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003624671
glycoside hydrolase family protein Tax=RBG_16_Planctomycetes_55_9_curated
beta-galactosidase
qh_1_scaffold_1327_13
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18675..19757)
DNA (1083bp) protein (361aa)
Transposase IS4 family protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BXZ5_NITHN
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:ADE15906.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus h
Displaying 13 items

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