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qh_1_scaffold_133

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_133_1
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3..632
DNA (630bp) protein (210aa)
Uncharacterized protein id=24628509 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
Uncharacterized protein {ECO:0000313|EMBL:ERG91257.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
qh_1_scaffold_133_2
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(629..1450)
DNA (822bp) protein (274aa)
Zinc finger SWIM domain protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0C490_9EURY
Zinc finger SWIM domain protein {ECO:0000313|EMBL:ELZ16754.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermoto
SWIM zinc finger domain protein
qh_1_scaffold_133_3
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1447..2163)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=M0A5Q8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY93676.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.;"
archaeal sugar-specific transcriptional regulator, TrmB family
qh_1_scaffold_133_4
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2288..3322)
DNA (1035bp) protein (345aa)
Orc1/cdc6 family replication initiation protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQZ3_HALUD
orc1/cdc6 family replication initiation protein
Orc1/cdc6 family replication initiation protein {ECO:0000313|EMBL:ACV11897.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Hal
qh_1_scaffold_133_5
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3481..4377
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0NIZ6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA57503.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 13561.;
transcriptional regulator
qh_1_scaffold_133_6
unknown

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4381..4578
DNA (198bp) protein (66aa)

This feature has no annotations

qh_1_scaffold_133_7
Natrinema sp. J7-2, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4506..4691)
DNA (186bp) protein (62aa)
Exonuclease VII small subunit n=1 Tax=halophilic archaeon DL31 PF0_9ARCH">RepID=G2MPF0_9ARCH
Exonuclease VII small subunit
Exonuclease VII small subunit {ECO:0000313|EMBL:AFO59556.1}; TaxID=406552 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema sp. (strain J7-2).;
qh_1_scaffold_133_8
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4693..5715)
DNA (1023bp) protein (341aa)
xseA1; exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease VII large subunit n=2 Tax=Haloarcula RepID=M0L570_HALJP
Exodeoxyribonuclease VII large subunit {ECO:0000313|EMBL:EMA27559.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula j
qh_1_scaffold_133_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6156..6548
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QT98_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW91827.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qh_1_scaffold_133_10
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6533..8476
DNA (1944bp) protein (648aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=S6CW61_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ35027.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
qh_1_scaffold_133_11
unknown

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8814..9269
DNA (456bp) protein (152aa)

This feature has no annotations

qh_1_scaffold_133_12
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9278..9583)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0L083_9EURY
qh_1_scaffold_133_13
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9699..10718
DNA (1020bp) protein (340aa)
Transcription initiation factor IIB n=2 Tax=Halorubrum distributum RepID=M0EMJ3_9EURY
Transcription initiation factor IIB {ECO:0000313|EMBL:ELZ55693.1}; TaxID=1227468 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distribu
tfbA_1; transcription initiation factor TFB 1
qh_1_scaffold_133_14
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10738..11499
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MXQ1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50381.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
qh_1_scaffold_133_15
unknown

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11576..12931
DNA (1356bp) protein (452aa)

This feature has no annotations

qh_1_scaffold_133_16
unknown

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13524..13922
DNA (399bp) protein (133aa)

This feature has no annotations

qh_1_scaffold_133_17
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14549..16720
DNA (2172bp) protein (724aa)
DNA repair helicase (EC:3.6.4.12)
DNA repair helicase n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PN95_9EURY
DNA repair helicase {ECO:0000313|EMBL:EMA70330.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 13916.;"
qh_1_scaffold_133_18
unknown

Not on your lists

16728..16880
DNA (153bp) protein (51aa)

This feature has no annotations

qh_1_scaffold_133_19
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16883..18901
DNA (2019bp) protein (673aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1NJT1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG97213.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
rad; ATPase invovled in DNA repair
qh_1_scaffold_133_20
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18905..19348
DNA (444bp) protein (148aa)
Uncharacterized protein n=2 Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18IH1_HALWD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ52201.2}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
qh_1_scaffold_133_21
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(19360..20211)
DNA (852bp) protein (284aa)
iscS; cysteine desulfurase (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
class V aminotransferase
Cysteine desulfurase id=3079938 bin=GWA1_Deltaproteobacteria_52_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
qh_1_scaffold_133_22
unknown

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20242..20433
DNA (192bp) protein (64aa)

This feature has no annotations

qh_1_scaffold_133_23
BJP_S1_SUB10_Methanoculleus_61_9, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20471..20878)
DNA (408bp) protein (136aa)
DNA sulfur modification protein DndE n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WJT3_9EURY
DNA sulfur modification protein DndE
Tax=BJP_S1_SUB10_Methanoculleus_61_9
qh_1_scaffold_133_24
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20875..22911)
DNA (2037bp) protein (679aa)
DNA sulfur modification protein DndD n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WMZ9_9EURY
DNA sulfur modification protein DndD {ECO:0000313|EMBL:ELY49718.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum ban
SMC protein-like protein
qh_1_scaffold_133_25
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22925..24403)
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WJZ6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY49717.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 106
hypothetical protein
qh_1_scaffold_133_26
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24494..24895)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NF88_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA55769.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qh_1_scaffold_133_27
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25025..25636)
DNA (612bp) protein (204aa)
Uncharacterized protein n=2 Tax=Halobacteriaceae RepID=L9YNR0_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY75870.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
Displaying 27 items

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