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qh_1_scaffold_139

Search features with annotation key words

Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_139_1
Salinibacter_ruber, Salinibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1..135
DNA (135bp) protein (45aa)
transposase IS4 family protein id=24657469 bin=Salinibacter_ruber species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=Salinibacter_ruber
transposase IS4 family protein id=24657469 bin=Salinibacter_ruber species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=Salinibacter_ruber
qh_1_scaffold_139_2
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

132..317
DNA (186bp) protein (62aa)
FG-GAP repeat protein id=4834882 bin=GWC2_Bacteroidetes_40_22 species=Pleurocapsa minor genus=Pleurocapsa taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
FG-GAP repeat-containing protein Tax=GWA2_Bacteroidetes_40_15_curated
FG-GAP repeat-containing protein
qh_1_scaffold_139_3
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

885..2633
DNA (1749bp) protein (583aa)
sulfatase (EC:3.1.6.-)
Sulfatase, family S1-17 {ECO:0000313|EMBL:CAZ97290.1}; EC=3.1.6.- {ECO:0000313|EMBL:CAZ97290.1};; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zob
Sulfatase, family S1-17 n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L7B6_ZOBGA
qh_1_scaffold_139_4
unknown

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2808..3293
DNA (486bp) protein (162aa)

This feature has no annotations

qh_1_scaffold_139_5

Not on your lists

comp(3122..4690)
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R6M1_ISOPI
Marine sediment metagenome DNA, contig: S06H3_L02471 {ECO:0000313|EMBL:GAI17249.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
qh_1_scaffold_139_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4783..6045)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJ95_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN73473.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qh_1_scaffold_139_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6313..8001)
DNA (1689bp) protein (563aa)
sodium:solute symporter n=1 Tax=Salisaeta longa RepID=UPI0003B64615
Na+/solute symporter
Na+/solute symporter {ECO:0000313|EMBL:ACY48383.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus
qh_1_scaffold_139_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8061..8363)
DNA (303bp) protein (101aa)
RNA polymerase subunit sigma-32 n=1 Tax=Salisaeta longa RepID=UPI0003B32777
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY48384.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qh_1_scaffold_139_9
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8400..8960)
DNA (561bp) protein (187aa)
Endoribonuclease L-PSP n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IZQ8_CYCMS
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:AEL25722.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobact
qh_1_scaffold_139_10
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(9082..10839)
DNA (1758bp) protein (586aa)
Cytochrome c class I n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IZR3_CYCMS
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:AEL25727.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain
qh_1_scaffold_139_11
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10854..14276)
DNA (3423bp) protein (1141aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KYH0_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE49411.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobact
qh_1_scaffold_139_12
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(14548..15867)
DNA (1320bp) protein (440aa)
Dihydroorotase n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4ANF2_MARSH
dihydroorotase
Dihydroorotase {ECO:0000313|EMBL:EAR02524.1}; TaxID=313603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribacter.;" source="Maribacter sp. (strain HTCC2170
qh_1_scaffold_139_13
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16076..17257)
DNA (1182bp) protein (394aa)
Selenocysteine synthase (Seryl-tRNASer selenium transferase) n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4ANE8_MARSH
selenocysteine synthase
Selenocysteine synthase (Seryl-tRNASer selenium transferase) {ECO:0000313|EMBL:EAR02520.1}; TaxID=313603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribact
qh_1_scaffold_139_14
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17375..18607)
DNA (1233bp) protein (411aa)
Selenocysteine synthase (Seryl-tRNASer selenium transferase) n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4ANE8_MARSH
selenocysteine synthase
Selenocysteine synthase (Seryl-tRNASer selenium transferase) {ECO:0000313|EMBL:EAR02520.1}; TaxID=313603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribact
qh_1_scaffold_139_15
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18714..19220)
DNA (507bp) protein (169aa)
Endoribonuclease L-PSP n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZMD6_9BACT
Endoribonuclease L-PSP {ECO:0000313|EMBL:EON75242.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacter
endoribonuclease L-PSP
qh_1_scaffold_139_16
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(19365..20261)
DNA (897bp) protein (299aa)
gluconolactonase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B57E37
SMP-30/gluconolaconase/LRE domain-containing protein Tax=RBG_16_Ignavibacteria_34_14_curated
SMP-30/gluconolaconase/LRE-like region-containing protein
qh_1_scaffold_139_17
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20267..21892)
DNA (1626bp) protein (542aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00037739B9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEL25730.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobac
qh_1_scaffold_139_18
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22117..25359)
DNA (3243bp) protein (1081aa)
TonB-dependent receptor n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZMC9_9BACT
TonB-dependent receptor plug
TonB-dependent receptor {ECO:0000313|EMBL:EON75237.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacte
qh_1_scaffold_139_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25921..27090)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5R3_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23368.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_1_scaffold_139_20
RLO_PLX_64_10, Bacteria

Not on your lists

27144..27500
DNA (357bp) protein (119aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
qh_1_scaffold_139_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27691..28107)
DNA (417bp) protein (139aa)
Rrf2 family transcriptional regulator n=1 Tax=Salisaeta longa RepID=UPI0003B636AC
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBH23845.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
qh_1_scaffold_139_22
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28526..28795
DNA (270bp) protein (90aa)
glutaryl-CoA dehydrogenase (EC:1.3.99.7)
Glutaryl-CoA dehydrogenase {ECO:0000313|EMBL:AEN73417.1}; EC=1.3.8.6 {ECO:0000313|EMBL:AEN73417.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermac
Glutaryl-CoA dehydrogenase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHV1_RHOMR
qh_1_scaffold_139_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28917..29093)
DNA (177bp) protein (59aa)
CoA-binding protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7P1_SALRM
CoA-binding protein
CoA-binding protein {ECO:0000313|EMBL:CBH24046.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
Displaying 23 items

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