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qh_1_scaffold_1870

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_1870_1
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(42..737)
DNA (696bp) protein (232aa)
Class III aminotransferase n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LIM6_9EURY
Class III aminotransferase {ECO:0000313|EMBL:EMA33381.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens J
class III aminotransferase
qh_1_scaffold_1870_2
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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999..1637
DNA (639bp) protein (213aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Halobacterium sp. DL1 RepID=G4IIG8_9EURY
Crotonase {ECO:0000313|EMBL:AHG02997.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
enoyl-CoA hydratase/isomerase
qh_1_scaffold_1870_3
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1743..2912
DNA (1170bp) protein (390aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ELY50458.1}; EC=2.3.1.9 {ECO:0000313|EMBL:ELY50458.1};; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrono
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WQ41_9EURY
qh_1_scaffold_1870_4
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2909..3316
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WLS8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY50419.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
hypothetical protein
qh_1_scaffold_1870_5
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3350..4282)
DNA (933bp) protein (311aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
Short chain dehydrogenase n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XJK1_9EURY
Short chain dehydrogenase {ECO:0000313|EMBL:ELY61939.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 1
qh_1_scaffold_1870_6
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4513..6183)
DNA (1671bp) protein (557aa)
Long-chain-fatty-acid-CoA ligase, putative n=1 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0CLJ2_ALCDB
long-chain-fatty-acid-CoA ligase
Long-chain-fatty-acid-CoA ligase, putative {ECO:0000313|EMBL:AFT72491.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" sourc
qh_1_scaffold_1870_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6665..7444
DNA (780bp) protein (260aa)
Transcription regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNG3_9EURY
Transcription regulator {ECO:0000313|EMBL:ELZ24163.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
IclR family transcriptional regulator
qh_1_scaffold_1870_8
unknown

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comp(7822..8082)
DNA (261bp) protein (87aa)

This feature has no annotations

qh_1_scaffold_1870_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8392..8781
DNA (390bp) protein (130aa)
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D361_9EURY
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein {ECO:0000313|EMBL:ELZ29122.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;"
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
qh_1_scaffold_1870_10
Haloferax sp. ATCC BAA-644, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(8947..9456)
DNA (510bp) protein (170aa)
Oxidoreductase n=3 Tax=Haloferax RepID=M0F6N3_9EURY
Oxidoreductase {ECO:0000313|EMBL:ELZ66034.1}; TaxID=1227462 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. ATCC BAA-644.;"
oxidoreductase
qh_1_scaffold_1870_11
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9453..9776)
DNA (324bp) protein (108aa)
Aldo/keto reductase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JAU7_HALJB
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ADJ14819.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (s
qh_1_scaffold_1870_12
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9878..10123
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HTD6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AKH98697.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum su
hypothetical protein
qh_1_scaffold_1870_13
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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10135..10563
DNA (429bp) protein (143aa)
Bacterio-opsin activator-like protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L9YGX0_NATP1
PAS domain S-box
Bacterio-opsin activator-like protein {ECO:0000313|EMBL:ELY72782.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum
qh_1_scaffold_1870_14
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10827..11249
DNA (423bp) protein (141aa)
Glutamate dehydrogenase n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JJP1_9EURY
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185, ECO:0000313|EMBL:EMA07915.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Ha
glutamate dehydrogenase/leucine dehydrogenase
Displaying 14 items

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