ggKbase home page

qh_1_scaffold_2162

Search features with annotation key words

Displaying 17 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_2162_1
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..381
DNA (381bp) protein (127aa)
Inner-membrane translocator n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LK71_SYNFM
branched-chain amino acid ABC transporter, membrane protein; K01997 branched-chain amino acid transport system permease protein Tax=RBG_16_Gamma2_60_9_curated
inner-membrane translocator
qh_1_scaffold_2162_2
RBG_19FT_COMBO_Deltaproteobacteria_46_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

378..983
DNA (606bp) protein (202aa)
Branched-chain amino acid ABC transporter, permease protein (BraE-1) n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O30014_ARCFU
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_9_curated
braE-1; branched-chain amino acid ABC transporter permease
qh_1_scaffold_2162_3
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

964..1419
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QKH9_RALPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW90613.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii
qh_1_scaffold_2162_4
Geobacillus thermoleovorans, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1619..2290)
DNA (672bp) protein (224aa)
Amino acid ABC transporter ATPase n=1 Tax=Geobacillus sp. JF8 RepID=S6A3R8_9BACI
ABC transporter
ABC transporter protein {ECO:0000313|EMBL:AEV20633.1}; TaxID=1111068 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus; Geobacillus thermoleovorans group.;" source="Geobacil
qh_1_scaffold_2162_5
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2413..3945)
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WN89_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY50924.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
hypothetical protein
qh_1_scaffold_2162_6
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4129..4728)
DNA (600bp) protein (200aa)
methionine synthase II (cobalamin-independent)-like protein; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] id=24616469 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Methionine synthase II (Cobalamin-independent)-like protein {ECO:0000313|EMBL:ESP87613.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Ha
methionine synthase vitamin-B12 independent
qh_1_scaffold_2162_7
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4733..5284)
DNA (552bp) protein (184aa)
Methionine synthase II (Cobalamin-independent)-like protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZL5_9EURY
methionine synthase
Methionine synthase {ECO:0000313|EMBL:AHG02136.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.;"
qh_1_scaffold_2162_8
unknown

Not on your lists

comp(5307..5834)
DNA (528bp) protein (176aa)

This feature has no annotations

qh_1_scaffold_2162_9
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6471..6866
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TUA8_9EURY
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:GAD53839.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-5
hypothetical protein
qh_1_scaffold_2162_10
unknown

Not on your lists

comp(7014..7397)
DNA (384bp) protein (128aa)

This feature has no annotations

qh_1_scaffold_2162_11
unknown

Not on your lists

comp(7399..7896)
DNA (498bp) protein (166aa)

This feature has no annotations

qh_1_scaffold_2162_12
unknown

Not on your lists

comp(7936..8169)
DNA (234bp) protein (78aa)

This feature has no annotations

qh_1_scaffold_2162_13
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8166..8471)
DNA (306bp) protein (102aa)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XTE8_9EURY
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:ELY63913.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM
long-chain-fatty-acid--CoA ligase
qh_1_scaffold_2162_14
unknown

Not on your lists

comp(8495..8851)
DNA (357bp) protein (119aa)

This feature has no annotations

qh_1_scaffold_2162_15
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8848..9636)
DNA (789bp) protein (263aa)
4-chlorobenzoyl CoA ligase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUW7_9EURY
4-chlorobenzoyl CoA ligase {ECO:0000313|EMBL:EFW91774.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalop
AMP-dependent ligase
qh_1_scaffold_2162_16
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9743..10627)
DNA (885bp) protein (295aa)
2-hydroxyhepta-2,4-diene-1, 7-dioateisomerase/5-ca rboxymethyl-2-oxo-hex-3-ene-1,7-dioatedecarboxylase n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GQB9_HALVD
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:KDE57665.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halosta
xlnF; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
qh_1_scaffold_2162_17
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10730..11668)
DNA (939bp) protein (313aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IIG4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG03001.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
Displaying 17 items

View Taxonomy