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qh_1_scaffold_234

Search features with annotation key words

Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_234_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(118..861)
DNA (744bp) protein (248aa)
Putative nucleoside-diphosphate-sugar epimerase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PKB6_9EURY
Putative nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:ERH10871.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
3-beta hydroxysteroid dehydrogenase/isomerase family protein
qh_1_scaffold_234_2
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(910..1305)
DNA (396bp) protein (132aa)
Cupin n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L5L9_9EURY
Cupin {ECO:0000313|EMBL:EMA27285.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
cupin
qh_1_scaffold_234_3
unknown

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comp(1339..1488)
DNA (150bp) protein (50aa)

This feature has no annotations

qh_1_scaffold_234_4
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1686..2174)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TY09_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY54965.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
hypothetical protein
qh_1_scaffold_234_5
unknown

Not on your lists

comp(2248..2424)
DNA (177bp) protein (59aa)

This feature has no annotations

qh_1_scaffold_234_6
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2551..3339
DNA (789bp) protein (263aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547};
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0L0L3_9EURY
rrmJ; 23S rRNA methyltransferase
qh_1_scaffold_234_7
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3419..4654
DNA (1236bp) protein (412aa)
Alcohol dehydrogenase n=2 Tax=Haloarcula hispanica RepID=G0HUP4_HALHT
alcohol dehydrogenase
Alcohol dehydrogenase {ECO:0000313|EMBL:AHB66255.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;"
qh_1_scaffold_234_8
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4843..5640
DNA (798bp) protein (266aa)
CRISPR-associated protein Cas6 n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NNV6_HALUD
CRISPR-associated protein Cas6
CRISPR-associated protein Cas6 {ECO:0000313|EMBL:ACV11631.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensi
qh_1_scaffold_234_9
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5627..7738
DNA (2112bp) protein (704aa)
CRISPR-associated protein Csh1 family protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PNQ1_9EURY
CRISPR-associated protein Cas8b/Csh1 {ECO:0000313|EMBL:AKH97357.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanae
CRISPR-associated protein, Csh1
qh_1_scaffold_234_10
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7741..8808
DNA (1068bp) protein (356aa)
CRISPR-associated protein n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0B431_9EURY
CRISPR-associated protein Cas7/Csh2 {ECO:0000313|EMBL:AKH97358.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaer
CRISPR-associated protein, Csh2 family
qh_1_scaffold_234_11
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8811..9608
DNA (798bp) protein (266aa)
CRISPR-associated protein Cas5 Hmari subtype n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PHG7_9EURY
CRISPR-associated protein Cas5 {ECO:0000313|EMBL:AKH97359.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarch
CRISPR-associated protein, Cas5h
qh_1_scaffold_234_12
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9703..12198
DNA (2496bp) protein (832aa)
CRISPR-associated helicase Cas3 family protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=S6D8M3_9EURY
CRISPR-associated protein Cas3 {ECO:0000313|EMBL:AKH97360.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarch
CRISPR-associated helicase, Cas3
qh_1_scaffold_234_13
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12201..12761
DNA (561bp) protein (187aa)
CRISPR-associated protein Cas4 n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PNP7_9EURY
CRISPR-associated protein, Cas4a
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:ERJ06794.1}; CRISPR-associated protein, Cas4a {ECO:0000313|EMBL:CCQ33717.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacterial
qh_1_scaffold_234_14
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12764..13756
DNA (993bp) protein (331aa)
CRISPR-associated endonuclease Cas1 n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NNV0_HALUD
CRISPR-associated protein Cas1 {ECO:0000313|EMBL:AKH97362.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarch
CRISPR-associated protein Cas1
qh_1_scaffold_234_15
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13758..14021
DNA (264bp) protein (88aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2E4C3_9EURY
CRISPR-associated protein Cas2
qh_1_scaffold_234_16
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18773..19486)
DNA (714bp) protein (238aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IJ65_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AAV44359.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
qh_1_scaffold_234_17
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21828..22439)
DNA (612bp) protein (204aa)
Molybdenum cofactor biosynthesis protein B n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VZK7_9EURY
molybdenum cofactor biosynthesis protein B
Molybdenum cofactor biosynthesis protein B {ECO:0000313|EMBL:AGN01681.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchae
qh_1_scaffold_234_18
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22553..23599
DNA (1047bp) protein (349aa)
Alcohol dehydrogenase zinc-binding domain protein n=2 Tax=Haladaptatus paucihalophilus RepID=E7QPD4_9EURY
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:EFW94095.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="
Zn-dependent oxidoreductase, NADPH:quinone reductase
qh_1_scaffold_234_19
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23589..24002
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P352_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47524.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qh_1_scaffold_234_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24218..24832)
DNA (615bp) protein (205aa)
Isopentenyl-diphosphate Delta-isomerase (EC:5.3.3.2)
Isopentenyl-diphosphate delta-isomerase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLT6_9EURY
Isopentenyl-diphosphate delta-isomerase {ECO:0000313|EMBL:ELZ23578.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex
qh_1_scaffold_234_21
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25017..25562
DNA (546bp) protein (182aa)
DNA polymerase sliding clamp subunit n=1 Tax=Halomicrobium katesii RepID=UPI00037BEC1E
ferritin
Ferritin Dps family protein {ECO:0000313|EMBL:ACV48401.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohat
qh_1_scaffold_234_22
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25725..26378
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D353_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29283.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_1_scaffold_234_23
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26470..27105)
DNA (636bp) protein (212aa)
Threonine/homoserine/homoserine lactone efflux protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DXE3_9EURY
Threonine/homoserine/homoserine lactone efflux protein {ECO:0000313|EMBL:ELZ40166.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="
threonine/homoserine/homoserine lactone efflux protein
qh_1_scaffold_234_24
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28166..29287
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DEJ4_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH39281.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 1
qh_1_scaffold_234_25
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29454..29552)
DNA (99bp) protein (33aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JVW7_9EURY
Displaying 25 items

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