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qh_1_scaffold_288

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_288_1
unknown

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400..621
DNA (222bp) protein (74aa)

This feature has no annotations

qh_1_scaffold_288_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(671..1645)
DNA (975bp) protein (325aa)
5,10-methylenetetrahydromethanopterin reductase {ECO:0000256|HAMAP-Rule:MF_01091}; EC=1.5.98.2 {ECO:0000256|HAMAP-Rule:MF_01091};; Coenzyme F420-dependent N(5),N(10)-methylenetetrahydromethanopterin r
5,10-methylenetetrahydromethanopterin reductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY89_9EURY
5,10-methylenetetrahydrofolate reductase
qh_1_scaffold_288_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2004..2756)
DNA (753bp) protein (251aa)
cofE; F420-0:gamma-glutamyl ligase (EC:6.3.2.-)
Coenzyme F420:L-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_01258}; EC=6.3.2.31 {ECO:0000256|HAMAP-Rule:MF_01258};; EC=6.3.2.34 {ECO:0000256|HAMAP-Rule:MF_01258};; Coenzyme F420-0:L-glutamate ligase {
F420-0--gamma-glutamyl ligase n=1 Tax=Halomicrobium katesii RepID=UPI00037E5F7A
qh_1_scaffold_288_4
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2870..3433
DNA (564bp) protein (188aa)
hypothetical protein id=24645631 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH09852.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qh_1_scaffold_288_5
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3508..3963
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L765_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA29432.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
qh_1_scaffold_288_6
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3960..5717
DNA (1758bp) protein (586aa)
DNA polymerase IV n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JH99_HALVA
DNA polymerase IV {ECO:0000313|EMBL:EMA07030.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 29715
DNA polymerase
qh_1_scaffold_288_7
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5747..6196
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NUF8_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV11055.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
qh_1_scaffold_288_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6329..6811
DNA (483bp) protein (161aa)
hypothetical protein id=24649218 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH10307.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qh_1_scaffold_288_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7087..7626
DNA (540bp) protein (180aa)
fxsA; phage T7 exclusion suppressor FxsA id=24644349 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Protein affecting phage T7 exclusion by the F plasmid {ECO:0000313|EMBL:ERH08581.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64
fxsA; phage T7 exclusion suppressor FxsA
qh_1_scaffold_288_10
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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8056..8868
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9YCI4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY70613.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
qh_1_scaffold_288_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8865..9077
DNA (213bp) protein (71aa)
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D8X2_9EURY
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:ELZ30594.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halos
ECF subfamily RNA polymerase sigma-24 subunit
qh_1_scaffold_288_12
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9074..10690
DNA (1617bp) protein (539aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HS79_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB67142.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
qh_1_scaffold_288_13
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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10993..12165
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AEH0_NATA1
Uncharacterized protein {ECO:0000313|EMBL:ELY97135.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 7001
qh_1_scaffold_288_14
unknown

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12162..13106
DNA (945bp) protein (315aa)

This feature has no annotations

qh_1_scaffold_288_15
unknown

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13302..13574
DNA (273bp) protein (91aa)

This feature has no annotations

qh_1_scaffold_288_16
unknown

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comp(13520..13657)
DNA (138bp) protein (46aa)

This feature has no annotations

qh_1_scaffold_288_17
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13863..14294)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0DK45_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ35198.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.
hypothetical protein
qh_1_scaffold_288_18
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(14382..14483)
DNA (102bp) protein (34aa)
ISH8-type transposase {ECO:0000313|EMBL:EMA13337.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC 33
Displaying 18 items

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