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qh_1_scaffold_44

Search features with annotation key words

Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_44_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..945)
DNA (945bp) protein (315aa)
glycosyl hydrolase, partial n=1 Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B47E08
glycosyl hydrolase Tax=RBG_16_Gemmatimonadetes_66_8_curated
glycosyl hydrolase
qh_1_scaffold_44_2
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1042..2424)
DNA (1383bp) protein (461aa)
carbohydrate-binding protein SusD n=1 Tax=Salisaeta longa RepID=UPI0003B3AD56
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ98730.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
qh_1_scaffold_44_3
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2668..5787)
DNA (3120bp) protein (1040aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Salisaeta longa RepID=UPI0003B77068
TonB-dependent receptor plug {ECO:0000313|EMBL:CCH51658.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
TonB-dependent receptor plug
qh_1_scaffold_44_4
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6451..7041)
DNA (591bp) protein (197aa)
Integrase n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Y7M5_PARAH
integrase
Integrase {ECO:0000313|EMBL:AGT11505.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.
qh_1_scaffold_44_5
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

comp(7386..9380)
DNA (1995bp) protein (665aa)
WD40-like beta Propeller containing protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UX91_TERSS
WD40-like beta Propeller containing protein Tax=RBG_16_Zixibacteria_53_22_curated
WD40-like beta Propeller containing protein
qh_1_scaffold_44_6
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9528..10889)
DNA (1362bp) protein (454aa)
Conserved uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FUP1_STIAD
hypothetical protein
Conserved uncharacterized protein {ECO:0000313|EMBL:ADO75924.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" s
qh_1_scaffold_44_7
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10950..13877)
DNA (2928bp) protein (976aa)
Putative outer membrane protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08TB0_STIAD
TonB-dependent receptor
Putative outer membrane protein {ECO:0000313|EMBL:EAU63723.1}; TonB-dependent receptor {ECO:0000313|EMBL:ADO75923.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales;
qh_1_scaffold_44_8
unknown

Not on your lists

14216..14344
DNA (129bp) protein (43aa)

This feature has no annotations

qh_1_scaffold_44_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14699..15412)
DNA (714bp) protein (238aa)
Phage integrase family n=1 Tax=Salinibacter ruber (strain M8) RepID=D6CVZ9_SALRM
xerC; Phage integrase family
Phage integrase family {ECO:0000313|EMBL:CBH22828.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
qh_1_scaffold_44_10
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15720..16433)
DNA (714bp) protein (238aa)
Putative uncharacterized protein n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IZU3_PSEUL
metal-dependent hydrolase
Metal-dependent hydrolase {ECO:0000313|EMBL:AHK78159.1}; TaxID=1354791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodo
qh_1_scaffold_44_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16452..19709)
DNA (3258bp) protein (1086aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y7X6_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41552.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
qh_1_scaffold_44_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19804..20274
DNA (471bp) protein (157aa)
Transposase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCL6_SALRM
transposase
Transposase {ECO:0000313|EMBL:CBH25771.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8
qh_1_scaffold_44_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20373..20855
DNA (483bp) protein (161aa)
Transposase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCL7_SALRM
transposase
Transposase {ECO:0000313|EMBL:CBH25772.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8
qh_1_scaffold_44_14
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20900..23425)
DNA (2526bp) protein (842aa)
Putative uncharacterized protein id=3899800 bin=GWF2_Bacteroidetes_38_335 species=Ralstonia solanacearum genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein Tax=GWF2_Bacteroidetes_38_335_curated
hypothetical protein
qh_1_scaffold_44_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23598..24647)
DNA (1050bp) protein (350aa)
Helix-turn-helix domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MKL6_RHOM4
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ACY49680.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodother
qh_1_scaffold_44_16
Lyngbya confervoides, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(24787..25854)
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI000345683B
Appr-1-p processing protein {ECO:0000313|EMBL:KIF40435.1}; TaxID=1574623 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya confervoides BDU141951.;"
Appr-1-p processing protein
qh_1_scaffold_44_17
Halomonas sp. GFAJ-1, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25927..26565)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Halomonas sp. GFAJ-1 RepID=H0J0F8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EHK61490.1}; TaxID=1118153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. GFAJ-
hypothetical protein
qh_1_scaffold_44_18
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26611..27954)
DNA (1344bp) protein (448aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI0003641F5B
Uncharacterized protein {ECO:0000313|EMBL:KJH86851.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluoresce
Type I restriction-modification system specificity subunit S
qh_1_scaffold_44_19
unknown

Not on your lists

comp(28008..28133)
DNA (126bp) protein (42aa)

This feature has no annotations

qh_1_scaffold_44_20
delta proteobacterium MLMS-1, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28337..29767)
DNA (1431bp) protein (477aa)
Divergent AAA region n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NTT2_9DELT
Divergent AAA region {ECO:0000313|EMBL:EAT05119.1}; TaxID=262489 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium MLMS-1.;"
putative transcriptional regulator
qh_1_scaffold_44_21
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(29798..30610)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WET2_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ18915.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
qh_1_scaffold_44_22
unknown

Not on your lists

30805..31179
DNA (375bp) protein (125aa)

This feature has no annotations

qh_1_scaffold_44_23
Candidatus Accumulibacter sp. BA-94, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31318..31902
DNA (585bp) protein (195aa)
Uncharacterized protein {ECO:0000313|EMBL:EXI91524.1}; TaxID=1454005 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-94.;"
qh_1_scaffold_44_24
unknown

Not on your lists

31868..32305
DNA (438bp) protein (146aa)

This feature has no annotations

qh_1_scaffold_44_25
unknown

Not on your lists

comp(32890..33054)
DNA (165bp) protein (55aa)

This feature has no annotations

qh_1_scaffold_44_26
unknown

Not on your lists

comp(33619..33849)
DNA (231bp) protein (77aa)

This feature has no annotations

Displaying 26 items

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