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qh_1_scaffold_980

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_980_1
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1..246
DNA (246bp) protein (82aa)
putative endoribonuclease L-PSP; K07567 TdcF protein id=15192276 bin=GWC2_NOV_55_46 species=Desulfotomaculum reducens genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_NOV_55_46 organism_group=Proteobacteria
putative endoribonuclease L-PSP; K07567 TdcF protein Tax=GWC2_Deltaproteobacteria_55_46b_curated
translation initiation inhibitor
qh_1_scaffold_980_2
unknown

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407..670
DNA (264bp) protein (88aa)

This feature has no annotations

qh_1_scaffold_980_3

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738..2483
DNA (1746bp) protein (582aa)
Bacterial extracellular solute-binding protein (Fragment) n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZLE4_9ARCH
Bacterial extracellular solute-binding protein {ECO:0000313|EMBL:ESS03245.1}; Flags: Fragment;; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
Twin-arginine translocation pathway signal
qh_1_scaffold_980_4
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2555..3016)
DNA (462bp) protein (154aa)
Putative ferredoxin n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZK7_9EURY
Putative ferredoxin {ECO:0000313|EMBL:EFW90128.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus D
2Fe-2S ferredoxin
qh_1_scaffold_980_5
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3025..4146)
DNA (1122bp) protein (374aa)
Amidohydrolase 2 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZK8_9EURY
Amidohydrolase 2 {ECO:0000313|EMBL:EFW90129.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX25
amidohydrolase
qh_1_scaffold_980_6
unknown

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comp(4085..4219)
DNA (135bp) protein (45aa)

This feature has no annotations

qh_1_scaffold_980_7

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4296..5264
DNA (969bp) protein (323aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=uncultured archaeon A07HR67 RepID=V4XT14_9ARCH
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:ESS03246.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.
dipeptide/oligopeptide/nickel ABC transporter permease
qh_1_scaffold_980_8
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5261..6217
DNA (957bp) protein (319aa)
Dipeptide/oligopeptide/nickel ABC transporter permease n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HCN9_9EURY
Dipeptide/oligopeptide/nickel ABC transporter permease {ECO:0000313|EMBL:ESP88465.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobon
binding-protein-dependent transport systems inner membrane component
qh_1_scaffold_980_9

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6214..7248
DNA (1035bp) protein (345aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XXH1_9ARCH
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain protein {ECO:0000313|EMBL:ESS03247.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archae
oligopeptide/dipeptide ABC transporter ATPase
qh_1_scaffold_980_10

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7233..8261
DNA (1029bp) protein (343aa)
oligopeptide/dipeptide ABC transporter ATPase (EC:3.6.3.24)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XMM4_9ARCH
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain protein {ECO:0000313|EMBL:ESS03248.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archae
qh_1_scaffold_980_11
unknown

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8322..8849
DNA (528bp) protein (176aa)

This feature has no annotations

qh_1_scaffold_980_12
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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9387..10127
DNA (741bp) protein (247aa)
Amidohydrolase 3 n=2 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SVX8_NATMM
amidohydrolase
Amidohydrolase 3 {ECO:0000313|EMBL:ADD03697.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain ATCC 43099 / DSM
qh_1_scaffold_980_13
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10174..11562
DNA (1389bp) protein (463aa)
D-hydantoinase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GNR3_9EURY
D-hydantoinase {ECO:0000313|EMBL:ESP87031.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum tyrre
dht; D-hydantoinase
qh_1_scaffold_980_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11592..12368)
DNA (777bp) protein (259aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D088_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ELZ27534.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex
short-chain dehydrogenase/reductase SDR
qh_1_scaffold_980_15
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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12600..13049
DNA (450bp) protein (150aa)
Carboxypeptidase Taq n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CKR7_9EURY
Carboxypeptidase Taq {ECO:0000313|EMBL:ELZ22952.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 13563.
Carboxypeptidase Taq
Displaying 15 items

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