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qh_1_scaffold_3988

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_3988_1
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..510)
DNA (510bp) protein (170aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JPW8_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:EMA10428.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="H
livM3; ABC-type transport system permease protein (probable substrate branched-chain amino acids)
qh_1_scaffold_3988_2
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(514..1941)
DNA (1428bp) protein (476aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JMQ2_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:EMA10427.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="H
livH; ABC-type branched-chain amino acid transport system, permease I
qh_1_scaffold_3988_3
unknown

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comp(1928..2125)
DNA (198bp) protein (66aa)

This feature has no annotations

qh_1_scaffold_3988_4
unknown

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2702..2881
DNA (180bp) protein (60aa)

This feature has no annotations

qh_1_scaffold_3988_5
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3674..5008)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JF23_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN58846.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
qh_1_scaffold_3988_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5500..5862
DNA (363bp) protein (121aa)
Putative restriction/modification enzyme n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5P0_9EURY
Putative restriction/modification enzyme {ECO:0000313|EMBL:EMA53191.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
putative restriction/modification enzyme
qh_1_scaffold_3988_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5890..6855
DNA (966bp) protein (322aa)
Putative restriction/modification enzyme n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5P0_9EURY
Putative restriction/modification enzyme {ECO:0000313|EMBL:EMA53191.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
type I restriction-modification system methyltransferase subunit
qh_1_scaffold_3988_8
R_NC10_66_22, NC10, Bacteria

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7247..7852
DNA (606bp) protein (202aa)
NUDIX hydrolase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MKQ2_HALMO
NUDIX family hydrolase Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
ADP-ribose pyrophosphatase
qh_1_scaffold_3988_9
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(7913..8143)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W7C0_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN02807.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
qh_1_scaffold_3988_10
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8375..9130)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IY58_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA01797.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
Displaying 10 items

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