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qh_1_scaffold_1442

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_1442_1
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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297..524
DNA (228bp) protein (76aa)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6)
DNA-directed RNA polymerase subunit H n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JTM4_HALVA
qh_1_scaffold_1442_2
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

524..2089
DNA (1566bp) protein (522aa)
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:EMA11009.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EMA11009.1};; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
DNA-directed RNA polymerase subunit B'' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit B n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JSU5_HALVA
qh_1_scaffold_1442_3
Halobacteriaceae archaeon YGHS18, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2455..3468
DNA (1014bp) protein (338aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1429914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
RNA polymerase subunit B n=1 Tax=Halobacteriaceae archaeon YGHS32 RepID=V5RK60_9EURY
qh_1_scaffold_1442_4
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3423..3692
DNA (270bp) protein (90aa)
rpoB'; DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=244363 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
DNA-directed RNA polymerase n=9 Tax=Haloarcula RepID=C5NSB2_9EURY
qh_1_scaffold_1442_5
unknown

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comp(3700..4176)
DNA (477bp) protein (159aa)

This feature has no annotations

qh_1_scaffold_1442_6
unknown

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comp(4194..4874)
DNA (681bp) protein (227aa)

This feature has no annotations

qh_1_scaffold_1442_7
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5253..6506
DNA (1254bp) protein (418aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
DNA-directed RNA polymerase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KZS6_9EURY
qh_1_scaffold_1442_8
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6506..7681
DNA (1176bp) protein (392aa)
rpoA''; DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6) rbh
DNA-directed RNA polymerase subunit A'' {ECO:0000256|HAMAP-Rule:MF_00411}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00411};; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
DNA-directed RNA polymerase subunit A'' n=2 Tax=Haloarcula hispanica RepID=G0HSR2_HALHT
qh_1_scaffold_1442_9
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7681..8106
DNA (426bp) protein (142aa)
Transcription termination factor NusA n=3 Tax=Haloarcula RepID=Q5UZR6_HALMA
nusA; transcription elongation factor NusA-like protein
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="
qh_1_scaffold_1442_10
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


8199..8627
DNA (429bp) protein (143aa)
30S ribosomal protein S12 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XU20_NATM8
30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;"
qh_1_scaffold_1442_11
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


8630..9241
DNA (612bp) protein (204aa)
30S ribosomal protein S7 n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KFM7_HALAR
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480, ECO:0000256|RuleBase:RU003621}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;"
30S ribosomal protein S7
qh_1_scaffold_1442_12
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9472..10068
DNA (597bp) protein (199aa)
Dethiobiotin synthesis protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KGK0_HALAR
Dethiobiotin synthesis protein {ECO:0000313|EMBL:EMA19988.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentine
dethiobiotin synthase
qh_1_scaffold_1442_13
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10065..10763
DNA (699bp) protein (233aa)
Cobalt ABC transporter ATP-binding protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KYI3_9EURY
Cobalt ABC transporter ATPase {ECO:0000313|EMBL:ELZ30389.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pall
ABC transporter ATP-binding protein
qh_1_scaffold_1442_14
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11589..12878
DNA (1290bp) protein (430aa)
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:CCQ33657.1}; Two-component system NtrC family sensor histidine kinase PilS protein {ECO:0000313|EMBL:ERJ06736.1}; EC=2.7.13.3 {ECO:0
Multi-sensor signal transduction histidine kinase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PP02_9EURY
multi-sensor signal transduction histidine kinase
qh_1_scaffold_1442_15
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13023..13772)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JPU6_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA10996.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
qh_1_scaffold_1442_16
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14036..16222
DNA (2187bp) protein (729aa)
Elongation factor 2 n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LPG8_HALJP
fusA; elongation factor EF-2
Elongation factor 2 {ECO:0000256|HAMAP-Rule:MF_00054, ECO:0000256|SAAS:SAAS00088569}; Short=EF-2 {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Haloba
qh_1_scaffold_1442_17
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16458..16679
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HS86_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB67540.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
qh_1_scaffold_1442_18
unknown

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16750..17352
DNA (603bp) protein (201aa)

This feature has no annotations

qh_1_scaffold_1442_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17282..18364)
DNA (1083bp) protein (361aa)
ABC transporter n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIF3_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ22418.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
ABC transporter
qh_1_scaffold_1442_20
unknown

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comp(18365..18502)
DNA (138bp) protein (46aa)

This feature has no annotations

Displaying 20 items

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