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qh_1_scaffold_3111

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_3111_1
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..587)
DNA (585bp) protein (195aa)
truD; tRNA pseudouridine synthase D (EC:5.4.99.12)
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud
Probable tRNA pseudouridine synthase D n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KHG7_9EURY
qh_1_scaffold_3111_2
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1213..2271)
DNA (1059bp) protein (353aa)
Transporter n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LL51_HALJP
transporter
Transporter {ECO:0000313|EMBL:EMA33159.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.;"
qh_1_scaffold_3111_3
unknown

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2661..2819
DNA (159bp) protein (53aa)

This feature has no annotations

qh_1_scaffold_3111_4
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2821..3516)
DNA (696bp) protein (232aa)
psmB; proteasome subunit beta (EC:3.4.25.1)
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113, ECO:0000256|SAAS:SAAS00167423};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113};
Proteasome subunit beta n=2 Tax=Haloarcula hispanica RepID=G0HX05_HALHT
qh_1_scaffold_3111_5
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3513..3695)
DNA (183bp) protein (61aa)
psmA2; proteasome subunit alpha (EC:3.4.25.1)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
Proteasome subunit alpha n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K500_9EURY
qh_1_scaffold_3111_6
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3870..4247)
DNA (378bp) protein (126aa)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
Proteasome subunit alpha n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K747_9EURY
proteasome subunit alpha
qh_1_scaffold_3111_7
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4316..4678)
DNA (363bp) protein (121aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00628}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00628};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00628};; TaxID=1227452 species="Archaea; Euryarchaeota;
Peptidyl-tRNA hydrolase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JFH6_HALVA
qh_1_scaffold_3111_8
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4802..5389
DNA (588bp) protein (196aa)
Probable deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=1592728
Probable deoxycytidine triphosphate deaminase n=2 Tax=Haloarcula RepID=M0JCQ3_HALVA
deoxycytidine triphosphate deaminase
qh_1_scaffold_3111_9
unknown

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comp(5723..5920)
DNA (198bp) protein (66aa)

This feature has no annotations

qh_1_scaffold_3111_10
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5988..6383
DNA (396bp) protein (132aa)
DNA-binding protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KCA2_HALAR
DNA-binding protein {ECO:0000313|EMBL:EMA18846.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DSM 12
thiamine-phosphate synthase
qh_1_scaffold_3111_11
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6380..7036
DNA (657bp) protein (219aa)
Type 11 methyltransferase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LM94_HALJP
Type 11 methyltransferase {ECO:0000313|EMBL:EMA33145.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6
smtA2; type 11 methyltransferase
qh_1_scaffold_3111_12
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7233..7430)
DNA (198bp) protein (66aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA33142.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
qh_1_scaffold_3111_13
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7563..8486)
DNA (924bp) protein (308aa)
Putative ribose 1,5-bisphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00304}; EC=5.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00304};; Ribulose 1,5-bisphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00304}; TaxI
ribonucleoside-triphosphate reductase n=1 Tax=Halomicrobium katesii RepID=UPI00037D92AE
ribulose-1,5-biphosphate synthetase
qh_1_scaffold_3111_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(8600..9787)
DNA (1188bp) protein (396aa)
Dipeptidyl aminopeptidases/acylaminoacyl-peptidases n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7Q4_SALRM
dipeptidyl aminopeptidase/acylaminoacyl-peptidase
Dipeptidyl aminopeptidases/acylaminoacyl-peptidases {ECO:0000313|EMBL:CBH24059.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.
Displaying 14 items

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