ggKbase home page

qh_1_scaffold_101

Search features with annotation key words

Displaying items 1-30 of 32 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_101_1
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..593)
DNA (591bp) protein (197aa)
galE; nucleoside-diphosphate-sugar epimerase ( UDP-glucose 4-epimerase) (EC:5.1.3.2)
NAD-dependent epimerase/dehydratase n=1 Tax=Halobacterium sp. DL1 RepID=G4IF06_9EURY
Nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:AHG03653.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacter
qh_1_scaffold_101_2
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(968..1102)
DNA (135bp) protein (45aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QXG7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW90970.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
qh_1_scaffold_101_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1198..3270)
DNA (2073bp) protein (691aa)
nuclease id=24648037 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain protein {ECO:0000313|EMBL:ERH09166.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" sourc
OB-fold tRNA/helicase-type nucleic acid binding-protein
qh_1_scaffold_101_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3372..3635)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQD6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25470.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_1_scaffold_101_5
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3806..4534
DNA (729bp) protein (243aa)
DNA binding protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=L9V3L6_HALBP
DNA binding protein {ECO:0000313|EMBL:ELY31795.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense (st
DNA binding protein
qh_1_scaffold_101_6

Not on your lists

5154..5654
DNA (501bp) protein (167aa)
Peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase n=1 Tax=halophilic archaeon DL31 RepID=G2MMI1_9ARCH
peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase
Peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase {ECO:0000313|EMBL:AEN06380.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qh_1_scaffold_101_7
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6920..7258
DNA (339bp) protein (113aa)
Permease n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=L9ZM53_9EURY
Permease {ECO:0000313|EMBL:ELY86248.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.;"
putative permease
qh_1_scaffold_101_8
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7597..7887
DNA (291bp) protein (97aa)
UPF0175 family protein n=2 Tax=Haloquadratum walsbyi RepID=G0LHG3_HALWC
hypothetical protein
UPF0175 family protein {ECO:0000313|EMBL:CAJ52258.1}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
qh_1_scaffold_101_9
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7888..8400
DNA (513bp) protein (171aa)
DUF3368 family protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18EG1_HALWD
hypothetical protein
DUF3368 domain protein {ECO:0000313|EMBL:CAJ53666.1}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
qh_1_scaffold_101_10

Not on your lists

comp(8699..9835)
DNA (1137bp) protein (379aa)
glycerol-3-phosphate-transporting ATPase (EC:3.6.3.20)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZJA5_9ARCH
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:ESS02360.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
qh_1_scaffold_101_11
unknown

Not on your lists

comp(9840..9980)
DNA (141bp) protein (47aa)

This feature has no annotations

qh_1_scaffold_101_12
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9977..10849)
DNA (873bp) protein (291aa)
Sugar ABC transporter permease n=4 Tax=Haloferax RepID=M0FGR0_9EURY
Inner membrane ABC transporter permease protein YcjP {ECO:0000313|EMBL:CQR52856.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Hal
tsgC6; sugar ABC transporter permease
qh_1_scaffold_101_13
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10846..11766)
DNA (921bp) protein (307aa)
Sugar ABC transporter permease n=1 Tax=Haloferax sp. BAB2207 RepID=L5NU83_9EURY
tsgB6; sugar ABC transporter permease
ABC-type transport system permease protein (Probable substrate sugar) {ECO:0000313|EMBL:ADE01986.1}; Sugar ABC transporter permease {ECO:0000313|EMBL:ELY37492.1}; TaxID=309800 species="Archaea; Euryar
qh_1_scaffold_101_14

Not on your lists

comp(11787..13193)
DNA (1407bp) protein (469aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family n=1 Tax=uncultured archaeon A07HR67 RepID=V4XUY2_9ARCH
Carbohydrate ABC transporter substrate-binding protein, CUT1 family {ECO:0000313|EMBL:ESS02357.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
tsgA6; sugar ABC transporter substrate-binding protein
qh_1_scaffold_101_15

Not on your lists

13420..14514
DNA (1095bp) protein (365aa)
Peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase n=1 Tax=halophilic archaeon DL31 RepID=G2MMI1_9ARCH
peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase
Peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase {ECO:0000313|EMBL:AEN06380.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qh_1_scaffold_101_16
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14602..15471
DNA (870bp) protein (290aa)
Fe-S protein n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1MP19_9EURY
Fe-S protein {ECO:0000313|EMBL:ERG91649.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW1.;"
MOSC domain protein
qh_1_scaffold_101_17
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15484..16137)
DNA (654bp) protein (218aa)
Glutamine amidotransferase n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3T1D0_NATMM
glutamine amidotransferase
Glutamine amidotransferase {ECO:0000313|EMBL:ELY32413.1}; Glutamine amidotransferase class-I {ECO:0000313|EMBL:ADD07389.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Na
qh_1_scaffold_101_18
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16224..17498
DNA (1275bp) protein (425aa)
glutamate--ammonia ligase (EC:6.3.1.2)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SRZ0_9EURY
Glutamate--ammonia ligase {ECO:0000313|EMBL:ELY91686.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeirensis JCM 109
qh_1_scaffold_101_19
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17519..18031)
DNA (513bp) protein (171aa)
Transcriptional regulator, AsnC family n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YSZ9_9EURY
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:GAD51852.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum
trh9; transcriptional regulatory protein, AsnC family
qh_1_scaffold_101_20
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18295..19773
DNA (1479bp) protein (493aa)
Methylmalonate-semialdehyde dehydrogenase n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TYZ9_9EURY
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:EMA26987.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcul
methylmalonic acid semialdehyde dehydrogenase
qh_1_scaffold_101_21
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19889..21202
DNA (1314bp) protein (438aa)
Class III aminotransferase n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0A8R3_9EURY
class III aminotransferase
Class III aminotransferase {ECO:0000313|EMBL:ELY94282.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensis JCM 10
qh_1_scaffold_101_22
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21205..22197
DNA (993bp) protein (331aa)
ornithine cyclodeaminase (EC:4.3.1.12)
Alanine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00935}; Short=AlaDH {ECO:0000256|HAMAP-Rule:MF_00935};; EC=1.4.1.1 {ECO:0000256|HAMAP-Rule:MF_00935};; TaxID=931277 species="Archaea; Euryarchaeota; Ha
Alanine dehydrogenase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MDT6_HALMO
qh_1_scaffold_101_23
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22265..23614
DNA (1350bp) protein (450aa)
Aminotransferase class-III n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3T1E1_NATMM
class III aminotransferase
Aminotransferase class-III {ECO:0000313|EMBL:ADD07400.1}; Class III aminotransferase {ECO:0000313|EMBL:ELY32424.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbac
qh_1_scaffold_101_24
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23770..25212
DNA (1443bp) protein (481aa)
Aldehyde dehydrogenase (Acceptor) n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JD61_9EURY
Aldehyde dehydrogenase (Acceptor) {ECO:0000313|EMBL:EMA06916.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans
aldehyde dehydrogenase (acceptor)
qh_1_scaffold_101_25
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25967..27424
DNA (1458bp) protein (486aa)
Glutamyl-tRNA amidotransferase subunit A n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0ABK2_9EURY
Glutamyl-tRNA amidotransferase subunit A {ECO:0000313|EMBL:ELY96120.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahann
glutamyl-tRNA amidotransferase subunit A
qh_1_scaffold_101_26
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27460..28137)
DNA (678bp) protein (226aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HA
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CE82_9EURY
qh_1_scaffold_101_27
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28259..28738
DNA (480bp) protein (160aa)
DUF456 family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNF5_NATM8
DUF456 family protein
DUF456 family protein {ECO:0000313|EMBL:CCQ35456.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (st
qh_1_scaffold_101_28
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28845..29612)
DNA (768bp) protein (256aa)
Transcription initiation factor IIB n=5 Tax=Haloarcula RepID=Q5V147_HALMA
tfb5; transcription initiation factor IIB
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
qh_1_scaffold_101_29
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30070..31884)
DNA (1815bp) protein (605aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGT1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44937.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
glycosyl transferase
qh_1_scaffold_101_30
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(32012..33295)
DNA (1284bp) protein (428aa)
Pyrrolo-quinoline quinone n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=L9ZXI0_9EURY
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ELY89858.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.
Pyrrolo-quinoline quinone
Displaying items 1-30 of 32 in total

View Taxonomy