ggKbase home page

qh_1_scaffold_1017

Search features with annotation key words

Displaying 21 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_1017_1
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..120
DNA (120bp) protein (40aa)
Sugar ABC transporter permease n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NGT9_9EURY
Sugar ABC transporter permease {ECO:0000313|EMBL:EMA57031.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum D
binding-protein-dependent transporters inner membrane component
qh_1_scaffold_1017_2
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

122..1090
DNA (969bp) protein (323aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PAM8_9EURY
Binding-protein-dependent transporters inner membrane component {ECO:0000313|EMBL:EMA67061.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;"
binding-protein-dependent transporters inner membrane component
qh_1_scaffold_1017_3

Not on your lists

1093..2220
DNA (1128bp) protein (376aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZLT9_9ARCH
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:ESS03420.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
ABC transporter
qh_1_scaffold_1017_4
unknown

Not on your lists

2287..2730
DNA (444bp) protein (148aa)

This feature has no annotations

qh_1_scaffold_1017_5
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2766..4463)
DNA (1698bp) protein (566aa)
oligo-1,6-glucosidase, family GH13 (EC:3.2.1.10) id=24629016 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
oligo-1,6-glucosidase, family GH13 (EC:3.2.1.10)
Glycosidase {ECO:0000313|EMBL:ERG91759.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW1.;"
qh_1_scaffold_1017_6
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4600..4890
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PA22_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA66698.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
qh_1_scaffold_1017_7
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4937..6010)
DNA (1074bp) protein (358aa)
Transcriptional regulator, TrmB n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E444_9EURY
Transcriptional regulator, TrmB {ECO:0000313|EMBL:ELZ41139.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovoru
transcriptional regulator, TrmB
qh_1_scaffold_1017_8
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6168..7109
DNA (942bp) protein (314aa)
glycoside hydrolase family 68 (EC:2.4.1.10)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI0003629FA5
Glycoside hydrolase family 68 {ECO:0000313|EMBL:EMA67058.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14
qh_1_scaffold_1017_9
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7064..7438
DNA (375bp) protein (125aa)
sacB; levansucrase (EC:2.4.1.10)
Glycoside hydrolase family 68 n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E014_9EURY
Glycoside hydrolase family 68 {ECO:0000313|EMBL:ELZ41140.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum
qh_1_scaffold_1017_10
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7475..9724)
DNA (2250bp) protein (750aa)
Glycosyl hydrolase family 32 n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NL88_9EURY
Glycosyl hydrolase family 32 {ECO:0000313|EMBL:EMA57899.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM
glycosyl hydrolase family 32
qh_1_scaffold_1017_11
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10031..10618
DNA (588bp) protein (196aa)
XRE family transcriptional regulator/HTH DNA-binding protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KJV1_9EURY
XRE family transcriptional regulator/HTH DNA-binding protein {ECO:0000313|EMBL:EMA21637.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;
HTH DNA-binding protein
qh_1_scaffold_1017_12
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10731..11168)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BRT2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ12817.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolerans D
hypothetical protein
qh_1_scaffold_1017_13
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11171..12148)
DNA (978bp) protein (326aa)
Flap endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000256|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:000025
flap endonuclease 1 (EC:3.-.-.-)
Flap endonuclease 1 n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LBZ8_HALJP
qh_1_scaffold_1017_14
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12255..13085
DNA (831bp) protein (277aa)
hypothetical protein id=24647862 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH08991.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qh_1_scaffold_1017_15
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13114..13644)
DNA (531bp) protein (177aa)
acetyltransferase n=1 Tax=Halomicrobium katesii RepID=UPI000365215F
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACV48886.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mu
qh_1_scaffold_1017_16
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13801..14004)
DNA (204bp) protein (68aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=Q5V5T4_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV45118.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
qh_1_scaffold_1017_17
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14204..15199
DNA (996bp) protein (332aa)
Ornithine cyclodeaminase {ECO:0000313|EMBL:ERH09736.1}; EC=4.3.1.12 {ECO:0000313|EMBL:ERH09736.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic a
Ornithine cyclodeaminase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PH32_9EURY
Ornithine cyclodeaminase
qh_1_scaffold_1017_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15201..16331)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CW11_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27426.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_1_scaffold_1017_19
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16403..16627)
DNA (225bp) protein (75aa)
H/ACA RNA-protein complex component Gar1 n=2 Tax=Haloferax RepID=M0HIF0_9EURY
H/ACA RNA-protein complex component Gar1 {ECO:0000313|EMBL:ELZ85712.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elong
gar1; tRNA/rRNA pseudouridine synthase complex protein Gar1
qh_1_scaffold_1017_20
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16624..16902)
DNA (279bp) protein (93aa)
Signal recognition particle 19 kDa protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=SRP19_NATPD
srp19; signal recognition particle 19K protein
Signal recognition particle 19 kDa protein {ECO:0000255|HAMAP-Rule:MF_00305}; Short=SRP19 {ECO:0000255|HAMAP-Rule:MF_00305};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriale
qh_1_scaffold_1017_21
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16964..17296
DNA (333bp) protein (111aa)
hypothetical protein id=24648994 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH10129.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
Displaying 21 items

View Taxonomy