ggKbase home page

qh_1_scaffold_1270

Search features with annotation key words

Displaying 17 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_1270_1
unknown

Not on your lists

comp(113..373)
DNA (261bp) protein (87aa)

This feature has no annotations

qh_1_scaffold_1270_2
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(432..1370)
DNA (939bp) protein (313aa)
RNA methylase n=1 Tax=Natrinema gari JCM 14663 RepID=L9Z344_9EURY
RNA methylase {ECO:0000313|EMBL:ELY79578.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
RNA methylase
qh_1_scaffold_1270_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1442..2002
DNA (561bp) protein (187aa)
TATA-box-binding protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1PDU1_9EURY
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rul
TATA-box binding family protein
qh_1_scaffold_1270_4
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1917..3995)
DNA (2079bp) protein (693aa)
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopige
DNA methylase N-4/N-6 domain protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D9V4_HALXS
DNA methylase N-4/N-6 domain-containing protein
qh_1_scaffold_1270_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4042..4887)
DNA (846bp) protein (282aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000313|EMBL:ELZ30983.1}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D830_9EURY
qh_1_scaffold_1270_6

Not on your lists

4990..6159
DNA (1170bp) protein (390aa)
Putative metal-dependent membrane protease n=1 Tax=uncultured archaeon A07HR67 RepID=V4XWQ8_9ARCH
Putative metal-dependent membrane protease {ECO:0000313|EMBL:ESS03007.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
hypothetical protein
qh_1_scaffold_1270_7
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6681..7190)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DYD0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK40385.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
qh_1_scaffold_1270_8
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7183..7878)
DNA (696bp) protein (232aa)
hypothetical protein id=24634561 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
Putative nucleotidyltransferase {ECO:0000313|EMBL:ERG97363.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsby
hypothetical protein
qh_1_scaffold_1270_9
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8057..8221)
DNA (165bp) protein (55aa)
Transposase (ISH6) n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N3K0_9EURY
Transposase (ISH6) {ECO:0000313|EMBL:EMA52108.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 135
hypothetical protein
qh_1_scaffold_1270_10
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8378..9628
DNA (1251bp) protein (417aa)
trzA3; N-ethylammeline chlorohydrolase; K12960 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] id=24655971 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000256|HAMAP-Rule:MF_01281};; EC
amidohydrolase
qh_1_scaffold_1270_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9784..10362)
DNA (579bp) protein (193aa)
hypothetical protein id=24650058 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Putative integral membrane protein {ECO:0000313|EMBL:ERH11136.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qh_1_scaffold_1270_12
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10485..11399
DNA (915bp) protein (305aa)
hypothetical protein id=24650059 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH11137.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qh_1_scaffold_1270_13
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11443..12960)
DNA (1518bp) protein (506aa)
Uncharacterized protein (Fragment) n=1 Tax=halophilic archaeon J07HB67 RepID=U1PQC1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH12631.1}; Flags: Fragment;; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
hypothetical protein
qh_1_scaffold_1270_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13129..14403
DNA (1275bp) protein (425aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
Adenosylhomocysteinase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CZW7_9EURY
S-adenosyl-L-homocysteine hydrolase
qh_1_scaffold_1270_15
unknown

Not on your lists

14544..14750
DNA (207bp) protein (69aa)

This feature has no annotations

qh_1_scaffold_1270_16
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14732..15607
DNA (876bp) protein (292aa)
Arsenite oxidase small subunit AoxA n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DDL0_9EURY
Arsenite oxidase small subunit AoxA {ECO:0000313|EMBL:ELZ32898.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenqui
arsenite oxidase small subunit
qh_1_scaffold_1270_17
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15552..17876
DNA (2325bp) protein (775aa)
aoxB; arsenite oxidase large subunit AoxB (EC:1.20.98.1)
Arsenite oxidase large subunit n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LJJ6_9EURY
Arsenite oxidase large subunit {ECO:0000313|EMBL:EMA32584.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.
Displaying 17 items

View Taxonomy