ggKbase home page

qh_1_scaffold_1280

Search features with annotation key words

Displaying 15 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_1280_1
Natrinema sp. J7-2, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..484
DNA (483bp) protein (161aa)
PAS sensor protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9YMH1_9EURY
PAS sensor protein
PAS sensor protein {ECO:0000313|EMBL:AFO58522.1}; TaxID=406552 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema sp. (strain J7-2).;"
qh_1_scaffold_1280_2
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

494..1096
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0L234_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA26045.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
qh_1_scaffold_1280_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1238..1795
DNA (558bp) protein (186aa)
Acetyltransferase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PIU5_9EURY
Acetyltransferase {ECO:0000313|EMBL:ERH10019.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
GCN5-like N-acetyltransferase
qh_1_scaffold_1280_4
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1933..2805)
DNA (873bp) protein (291aa)
Alpha/beta hydrolase fold protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KQ09_9EURY
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EMA23286.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylol
putative hydrolase or acyltransferase of alpha/beta superfamily
qh_1_scaffold_1280_5
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2975..3610)
DNA (636bp) protein (212aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000313|EMBL:ELY64390.1}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000313|EMBL:ELY64390.1};; UMP pyrophosphorylase {ECO:
Uracil phosphoribosyltransferase n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XRI3_9EURY
upp; uracil phosphoribosyltransferase
qh_1_scaffold_1280_6
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3679..4269)
DNA (591bp) protein (197aa)
hypothetical protein; K07585 hypothetical protein id=24655508 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Putative PP-loop ATPase {ECO:0000313|EMBL:ERG88966.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
putative subunit of tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain
qh_1_scaffold_1280_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4269..4616)
DNA (348bp) protein (116aa)
probable DNA-binding protein id=24646618 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
DNA-binding protein J07HX64_02569 {ECO:0000256|HAMAP-Rule:MF_00026}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qh_1_scaffold_1280_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4749..7529)
DNA (2781bp) protein (927aa)
chromosome segregation protein; K03546 exonuclease SbcC id=24644254 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
DNA double-strand break repair Rad50 ATPase {ECO:0000256|HAMAP-Rule:MF_00449}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
chromosome segregation protein SMC
qh_1_scaffold_1280_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7526..8716)
DNA (1191bp) protein (397aa)
Metallophosphoesterase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CP71_9EURY
Metallophosphoesterase {ECO:0000313|EMBL:ELZ25016.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9
yhcR3; phosphoesterase
qh_1_scaffold_1280_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9069..9623
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1QVJ3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH09862.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qh_1_scaffold_1280_11
GWB2_Elusimicrobia_63_22_curated, Elusimicrobia, Bacteria

Not on your lists

9634..11730
DNA (2097bp) protein (699aa)
Uncharacterized protein id=1943016 bin=GWB2_Elusimicrobium_63_22 species=Phytophthora sojae genus=Phytophthora taxon_order=Peronosporales taxon_class=unknown phylum=unknown tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
hypothetical protein Tax=GWB2_Elusimicrobia_63_22_curated
hypothetical protein
qh_1_scaffold_1280_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12038..13609
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XN71_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ35350.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qh_1_scaffold_1280_13
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13643..14275
DNA (633bp) protein (211aa)
FG-GAP repeat-containing protein, possibly sugar-related id=24649104 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH10235.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
glycoside hydrolase family 10
qh_1_scaffold_1280_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14335..15066
DNA (732bp) protein (244aa)
Transcriptional regulator, MarR family n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P323_HALMD
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ACV47495.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrob
qh_1_scaffold_1280_15
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15173..15679)
DNA (507bp) protein (169aa)
hypothetical protein id=24655546 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Uncharacterized protein {ECO:0000313|EMBL:ERG88992.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
Displaying 15 items

View Taxonomy