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qh_1_scaffold_1398

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_1398_1
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..496
DNA (495bp) protein (165aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanyl-tRNA ligase subunit alpha {ECO:0000313|EMBL:EMA25632.1}; EC=6.1.1.20 {ECO:0000313|EMBL:EMA25632.1};; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
Phenylalanyl-tRNA ligase subunit alpha n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KWE7_9EURY
qh_1_scaffold_1398_2
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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496..2232
DNA (1737bp) protein (579aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00284};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284};
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KHZ1_HALAR
phenylalanyl-tRNA synthetase subunit beta
qh_1_scaffold_1398_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2441..3940
DNA (1500bp) protein (500aa)
Sulfatase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P068_HALMD
sulfatase
Sulfatase {ECO:0000313|EMBL:ACV48860.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (strain ATCC 7
qh_1_scaffold_1398_4
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4292..5599)
DNA (1308bp) protein (436aa)
DUF2029 family protein n=2 Tax=Halobacterium salinarum RepID=B0R7I8_HALS3
hypothetical protein
DUF2029 family protein {ECO:0000313|EMBL:CAP14707.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (s
qh_1_scaffold_1398_5
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5796..6083)
DNA (288bp) protein (96aa)
Translation initiation factor 1A n=10 Tax=Haloarcula RepID=IF1A_HALMA
eif1A1; translation initiation factor IF-1A
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Haloba
qh_1_scaffold_1398_6
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6184..6372
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI000368A86E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46836.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomi
qh_1_scaffold_1398_7
unknown

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comp(6606..6728)
DNA (123bp) protein (41aa)

This feature has no annotations

qh_1_scaffold_1398_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6856..8028
DNA (1173bp) protein (391aa)
Probable cell surface glycoprotein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU28_NATPD
cell surface glycoprotein
Probable cell surface glycoprotein {ECO:0000313|EMBL:CAI48355.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas ph
qh_1_scaffold_1398_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8045..10024)
DNA (1980bp) protein (660aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1PIF5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH10231.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qh_1_scaffold_1398_10
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10891..12291)
DNA (1401bp) protein (467aa)
tRNA cytidylyltransferase (EC:2.7.7.72)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:
CCA-adding enzyme n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NYN5_HALMD
qh_1_scaffold_1398_11
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12671..13435)
DNA (765bp) protein (255aa)
uroporphyrinogen-III synthase (EC:4.2.1.75)
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:CCQ32921.1}; EC=4.2.1.75 {ECO:0000313|EMBL:CCQ32921.1};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Uroporphyrinogen-III synthase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PKH1_9EURY
qh_1_scaffold_1398_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13439..14503)
DNA (1065bp) protein (355aa)
hemC; hydroxymethylbilane synthase (porphobilinogen deaminase) (EC:2.5.1.61)
Hydroxymethylbilane synthase (Porphobilinogen deaminase) {ECO:0000313|EMBL:CAI48754.1}; EC=2.5.1.61 {ECO:0000313|EMBL:CAI48754.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobact
Hydroxymethylbilane synthase (Porphobilinogen deaminase) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISY1_NATPD
qh_1_scaffold_1398_13
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(14662..15207)
DNA (546bp) protein (182aa)
UPF0290 protein C437_17792 n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IV13_HALVA
UPF0290 protein C437_17792 {ECO:0000256|HAMAP-Rule:MF_01117}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismort
cdsA; hypothetical protein
qh_1_scaffold_1398_14
unknown

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comp(15319..15570)
DNA (252bp) protein (84aa)

This feature has no annotations

qh_1_scaffold_1398_15
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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16074..16748
DNA (675bp) protein (225aa)
conserved hypothetical protein (DUF502) id=24649800 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH10881.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qh_1_scaffold_1398_16
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16932..17630
DNA (699bp) protein (233aa)
Riboflavin kinase {ECO:0000256|HAMAP-Rule:MF_01285}; Short=RFK {ECO:0000256|HAMAP-Rule:MF_01285};; EC=2.7.1.161 {ECO:0000256|HAMAP-Rule:MF_01285};; CTP-dependent riboflavin kinase {ECO:0000256|HAMAP-R
Riboflavin kinase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PKJ4_9EURY
hypothetical protein
qh_1_scaffold_1398_17
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17651..18220
DNA (570bp) protein (190aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|RuleBase:RU003843}; Short=DHBP synthase {ECO:0000256|RuleBase:RU003843};; EC=4.1.99.12 {ECO:0000256|RuleBase:RU003843};; TaxID=1227488 specie
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Halomicrobium katesii RepID=UPI000367D1CA
3,4-dihydroxy-2-butanone 4-phosphate synthase
qh_1_scaffold_1398_18
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18242..18922)
DNA (681bp) protein (227aa)
phosphoserine phosphatase n=1 Tax=Halomicrobium katesii RepID=UPI00037695C4
HAD-superfamily hydrolase
HAD-superfamily hydrolase, subfamily IB (PSPase-like) {ECO:0000313|EMBL:ACV46952.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" sou
Displaying 18 items

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