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qh_1_scaffold_143

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Displaying items 1-30 of 50 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_143_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..202
DNA (201bp) protein (67aa)
cold shock protein id=24649192 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:ERH10285.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
cold-shock DNA-binding domain protein
qh_1_scaffold_143_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(363..1133)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWN5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26862.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_1_scaffold_143_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1376..1906)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CZZ3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ28198.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_1_scaffold_143_4
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1939..2958)
DNA (1020bp) protein (340aa)
threonine dehydratase n=1 Tax=Halomicrobium katesii RepID=UPI000382D2D0
Threonine dehydratase {ECO:0000313|EMBL:ERG89972.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
pyridoxal-5'-phosphate-dependent protein subunit beta
qh_1_scaffold_143_5
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3142..3834)
DNA (693bp) protein (231aa)
Rhodanese n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XUM0_9EURY
Rhodanese {ECO:0000313|EMBL:ELY64323.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 18795.;"
Rhodanese-related sulfurtransferase
qh_1_scaffold_143_6
unknown

Not on your lists

3952..5160
DNA (1209bp) protein (403aa)

This feature has no annotations

qh_1_scaffold_143_7
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5157..5756
DNA (600bp) protein (200aa)
Restriction endonuclease n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HQM2_9EURY
Restriction endonuclease {ECO:0000313|EMBL:ESP90219.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halob
qh_1_scaffold_143_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5831..6409
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYN8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27763.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_1_scaffold_143_9
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6505..6720
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Haloarcula hispanica N601 RepID=V5TPN7_HALHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB67296.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
qh_1_scaffold_143_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6772..8091)
DNA (1320bp) protein (440aa)
Phosphoglucosamine mutase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CZ99_9EURY
Phosphoglucosamine mutase {ECO:0000313|EMBL:ELZ27767.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
phosphoglucosamine mutase
qh_1_scaffold_143_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8155..8886)
DNA (732bp) protein (244aa)
Isoprenylcysteine carboxyl methyltransferase (ICMT) family n=1 Tax=halophilic archaeon J07HX64 RepID=U1QUY0_9EURY
Isoprenylcysteine carboxyl methyltransferase (ICMT) family {ECO:0000313|EMBL:ERH11118.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J0
isoprenylcysteine carboxyl methyltransferase
qh_1_scaffold_143_12
unknown

Not on your lists

9000..9221
DNA (222bp) protein (74aa)

This feature has no annotations

qh_1_scaffold_143_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9506..10258)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR21_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25068.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
3-isopropylmalate dehydratase
qh_1_scaffold_143_14
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10264..10446)
DNA (183bp) protein (61aa)
zn-ribbon RNA-binding protein; K11130 H/ACA ribonucleoprotein complex subunit 3 id=24655716 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Ribosome biogenesis protein Nop10 {ECO:0000256|HAMAP-Rule:MF_00803}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
H/ACA RNA-protein complex component Nop10p
qh_1_scaffold_143_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10456..11007)
DNA (552bp) protein (184aa)
Translation initiation factor IF-2 subunit alpha n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4F4_9EURY
Translation initiation factor IF-2 subunit alpha {ECO:0000313|EMBL:EMA52766.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Ha
translation initiation factor IF-2
qh_1_scaffold_143_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11239..11412)
DNA (174bp) protein (58aa)
30S ribosomal protein S27e n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CPB9_9EURY
30S ribosomal protein S27e {ECO:0000256|HAMAP-Rule:MF_00371, ECO:0000256|RuleBase:RU000671}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.
30S ribosomal protein S27e
qh_1_scaffold_143_17
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11415..11696)
DNA (282bp) protein (94aa)
rpl44e; 50S ribosomal protein L44e; K02929 large subunit ribosomal protein L44e id=24649688 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
50S ribosomal protein L44e {ECO:0000256|HAMAP-Rule:MF_01476}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
rpl44e; 50S ribosomal protein L44e
qh_1_scaffold_143_18
unknown

Not on your lists

11994..12497
DNA (504bp) protein (168aa)

This feature has no annotations

qh_1_scaffold_143_19
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12922..13344)
DNA (423bp) protein (141aa)
Blue (Type 1) copper domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWN2_HALMD
blue (type 1) copper domain-containing protein
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:ACV48242.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" so
qh_1_scaffold_143_20
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13540..13827
DNA (288bp) protein (96aa)
Sugar phosphotransferase system (PTS) protein Hpr n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R4V8_HALMT
hpr; sugar phosphotransferase system (PTS) protein Hpr
Phosphocarrier protein HPr {ECO:0000313|EMBL:AHZ21373.1}; Sugar phosphotransferase system (PTS) protein Hpr {ECO:0000313|EMBL:AFK19268.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; H
qh_1_scaffold_143_21
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14026..14415)
DNA (390bp) protein (130aa)
Dihydroxyacetone kinase phosphotransfer subunit n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W9Z2_9EURY
dihydroxyacetone kinase phosphotransfer subunit
Dihydroxyacetone kinase phosphotransfer subunit {ECO:0000313|EMBL:AGN02049.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salina
qh_1_scaffold_143_22
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14416..15123)
DNA (708bp) protein (236aa)
DhaL protein n=1 Tax=Halogranum salarium B-1 RepID=J3JHR9_9EURY
DhaL protein {ECO:0000313|EMBL:EJN61239.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
dihydroxyacetone kinase
qh_1_scaffold_143_23
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15189..16187)
DNA (999bp) protein (333aa)
Dihydroxyacetone kinase subunit DhaK n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W610_9EURY
dihydroxyacetone kinase subunit DhaK
Dihydroxyacetone kinase subunit DhaK {ECO:0000313|EMBL:AGN02047.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp.
qh_1_scaffold_143_24

Not on your lists

16389..17642
DNA (1254bp) protein (418aa)
Sugar phosphate permease n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y588_9ARCH
Sugar phosphate permease {ECO:0000313|EMBL:ESS07871.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
major facilitator superfamily transporter
qh_1_scaffold_143_25
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17769..18173
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CCI8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KDE58764.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
hypothetical protein
qh_1_scaffold_143_26
unknown

Not on your lists

comp(18195..18314)
DNA (120bp) protein (40aa)

This feature has no annotations

qh_1_scaffold_143_27
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18539..18874
DNA (336bp) protein (112aa)
transcription factor TFIIB id=24648941 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB {ECO:0000313|EMBL:ERH10074.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;
tfbA_4; transcription initiation factor TFB 4
qh_1_scaffold_143_28
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18875..19387)
DNA (513bp) protein (171aa)
Cytidyltransferase-related domain protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NRF3_HALUD
phosphopantetheine adenylyltransferase
Cytidyltransferase-related domain protein {ECO:0000313|EMBL:ACV10590.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabd
qh_1_scaffold_143_29
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19436..20170)
DNA (735bp) protein (245aa)
Transcriptional regulator, TrmB n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NXB9_HALMD
TrmB family transcriptional regulator
Transcriptional regulator, TrmB {ECO:0000313|EMBL:ACV48353.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muk
qh_1_scaffold_143_30
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20223..21527)
DNA (1305bp) protein (435aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1085028 species="Archaea; Euryarchaeota; Halo
DNA polymerase IV n=1 Tax=halophilic archaeon J07HX64 RepID=U1QR25_9EURY
DNA polymerase IV
Displaying items 1-30 of 50 in total

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