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qh_1_scaffold_179

Search features with annotation key words

Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_179_1
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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154..2058
DNA (1905bp) protein (635aa)
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:CDK39727.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CDK39727.1};; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales;
Multi-sensor signal transduction histidine kinase n=1 Tax=Halorubrum sp. AJ67 RepID=V6DU72_9EURY
multi-sensor signal transduction histidine kinase
qh_1_scaffold_179_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


2273..4936
DNA (2664bp) protein (888aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1085028 species="Archaea; Euryarc
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] id=24646791 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
leucyl-tRNA synthetase
qh_1_scaffold_179_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5493..6203)
DNA (711bp) protein (237aa)
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D509_9EURY
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP {ECO:0000313|EMBL:ELZ30566.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Ha
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
qh_1_scaffold_179_4
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6200..7861)
DNA (1662bp) protein (554aa)
cobD1; L-threonine-O-3-phosphate decarboxylase (EC:4.1.1.81)
Histidinol-phosphate aminotransferase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KGC0_HALAR
Histidinol-phosphate aminotransferase {ECO:0000313|EMBL:EMA19209.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula ar
qh_1_scaffold_179_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7892..8500)
DNA (609bp) protein (203aa)
4-diphosphocytidyl-2C-methyl-D-erythritol synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D513_9EURY
4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000313|EMBL:ELZ30571.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="
cobalamin biosynthesis protein CobY
qh_1_scaffold_179_6
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8485..9279)
DNA (795bp) protein (265aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phospha
Cobalamin synthase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NMW2_HALUD
cobalamin 5'-phosphate synthase
qh_1_scaffold_179_7
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9279..10292)
DNA (1014bp) protein (338aa)
Probable cobalamin biosynthesis protein CobD n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0P572_9EURY
Probable cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Haloru
cobalamin biosynthesis protein CobD
qh_1_scaffold_179_8
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10371..11186)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TWV7_9EURY
Regulatory protein Crp {ECO:0000313|EMBL:EMA56411.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM
regulatory protein Crp
qh_1_scaffold_179_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11324..12253)
DNA (930bp) protein (310aa)
Cysteine synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLN1_9EURY
Cysteine synthase {ECO:0000313|EMBL:ELZ24156.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
pyridoxal-5'-phosphate-dependent protein subunit beta
qh_1_scaffold_179_10
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12322..12987)
DNA (666bp) protein (222aa)
Haloacid dehalogenase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LU51_9EURY
Haloacid dehalogenase {ECO:0000313|EMBL:EMA35625.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
haloacid dehalogenase
qh_1_scaffold_179_11
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13087..15609)
DNA (2523bp) protein (841aa)
DNA/RNA helicase, superfamily i n=1 Tax=Halogranum salarium B-1 RepID=J2ZEU7_9EURY
DNA/RNA helicase, superfamily i {ECO:0000313|EMBL:EJN59190.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
DNA/RNA helicase, superfamily i
qh_1_scaffold_179_12
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15682..17169)
DNA (1488bp) protein (496aa)
qor_2; NADPH:quinone reductase 2 (EC:1.6.5.5); K00344 NADPH2:quinone reductase [EC:1.6.5.5] id=24645979 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
qor_2; NADPH:quinone reductase 2 (EC:1.6.5.5)
NADPH:quinone reductase related Zn-dependent oxidoreductase {ECO:0000313|EMBL:ERH10197.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J
qh_1_scaffold_179_13
Halomicrobium katesii, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17302..17529)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI0003736F1F
qh_1_scaffold_179_14
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17874..18416)
DNA (543bp) protein (181aa)
Uncharacterized protein id=24655197 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Uncharacterized protein {ECO:0000313|EMBL:ERG88710.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
qh_1_scaffold_179_15
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18577..21480)
DNA (2904bp) protein (968aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] id=24644152 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
ATP dependent helicase, Lhr family {ECO:0000313|EMBL:ERH08384.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
DEAD/DEAH box helicase
qh_1_scaffold_179_16
unknown

Not on your lists

comp(21553..21741)
DNA (189bp) protein (63aa)

This feature has no annotations

qh_1_scaffold_179_17
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22379..23257)
DNA (879bp) protein (293aa)
SMP-30/Gluconolaconase/LRE-like region-containing protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DCE5_HALXS
SMP-30/gluconolaconase/LRE-like region-containing protein
SMP-30/Gluconolaconase/LRE-like region-containing protein {ECO:0000313|EMBL:AEH38405.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="H
qh_1_scaffold_179_18
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23433..24227)
DNA (795bp) protein (265aa)
Transcription regulator n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JFL1_9EURY
Transcription regulator {ECO:0000313|EMBL:EMA06465.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans ATCC 3596
arcR5; ArcR family transcription regulator
qh_1_scaffold_179_19
unknown

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comp(24367..24693)
DNA (327bp) protein (109aa)

This feature has no annotations

qh_1_scaffold_179_20
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24894..25796)
DNA (903bp) protein (301aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Bacillus selenitireducens (strain ATCC 700615 / DSM 15326 / MLS10) RepID=D6XX97_BACIE
binding-protein-dependent transporter inner membrane component
ABC transporter permease {ECO:0000313|EMBL:KHK95527.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
qh_1_scaffold_179_21
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25796..26698)
DNA (903bp) protein (301aa)
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31948.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacter
ABC transporter integral membrane protein; K02025 multiple sugar transport system permease protein id=24613697 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
ABC transporter permease
qh_1_scaffold_179_22
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(26786..28144)
DNA (1359bp) protein (453aa)
Extracellular solute-binding protein family 1 n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CQ63_TRURR
family 1 extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADI14847.1}; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;
qh_1_scaffold_179_23
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28240..29352)
DNA (1113bp) protein (371aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NVI1_HALBP
sugar ABC transporter ATP-binding protein
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:ADQ68865.1}; Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELY28707.1}; TaxID=469382 species="Archaea; Eur
qh_1_scaffold_179_24
RLO_PLX_64_10, Bacteria

Not on your lists

comp(29469..30614)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Enterobacter cloacae S611 RepID=V5AZP0_ENTCL
Mandelate racemase/muconate lactonizing protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Mandelate racemasemuconate lactonizing protein
qh_1_scaffold_179_25
RLO_PLX_64_10, Bacteria

Not on your lists

30712..31878
DNA (1167bp) protein (389aa)
mandelate racemase n=1 Tax=Agromyces subbeticus RepID=UPI0003B371F4
Mandelate racemase/muconate lactonizing protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Mandelate racemasemuconate lactonizing protein
qh_1_scaffold_179_26
Vibrio scophthalmi, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32158..33087)
DNA (930bp) protein (310aa)
putative Dihydrodipicolinate synthetase (EC:4.3.3.7)
Dihydrodipicolinate synthetase n=1 Tax=Vibrio scophthalmi LMG 19158 RepID=F9RV63_9VIBR
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:EGU29787.1}; TaxID=870967 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio scophthalmi LMG 1
qh_1_scaffold_179_27
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

33201..33965
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0FWU6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ63727.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense DSM 18310.;
sugar epimerase/dehydratase homolog
qh_1_scaffold_179_28
unknown

Not on your lists

34294..34506
DNA (213bp) protein (71aa)

This feature has no annotations

qh_1_scaffold_179_29
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

34738..36678
DNA (1941bp) protein (647aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LJX3_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA33917.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
chromosome segregation protein SMC
qh_1_scaffold_179_30
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

36681..37304
DNA (624bp) protein (208aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=Q5V073_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA15017.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
Displaying items 1-30 of 35 in total

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