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qh_1_scaffold_543

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_543_1
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2..493
DNA (492bp) protein (164aa)
Peptidase M24 n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0AY46_9EURY
Peptidase M24 {ECO:0000313|EMBL:ELZ03596.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
peptidase M24
qh_1_scaffold_543_2
unknown

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comp(725..1168)
DNA (444bp) protein (148aa)

This feature has no annotations

qh_1_scaffold_543_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1327..2055)
DNA (729bp) protein (243aa)
top1; topoisomerase DNA binding C4 zinc finger; K03168 DNA topoisomerase I [EC:5.99.1.2] id=24646158 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Putative nuclease of the RecB family {ECO:0000313|EMBL:ERH10337.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
DNA topoisomerase I
qh_1_scaffold_543_4
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2122..2721)
DNA (600bp) protein (200aa)
AraC family transcriptional regulator n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JG76_HALVA
AraC family transcriptional regulator {ECO:0000313|EMBL:EMA08112.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula val
AraC family transcriptional regulator
qh_1_scaffold_543_5
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2817..3272
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L765_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA29432.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
qh_1_scaffold_543_6
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3269..5008
DNA (1740bp) protein (580aa)
DNA polymerase IV n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JUP1_9EURY
DNA polymerase IV {ECO:0000313|EMBL:EMA11684.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC 33799.
polX; DNA polymerase IV
qh_1_scaffold_543_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5206..5697
DNA (492bp) protein (164aa)
hypothetical protein id=24649218 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH10307.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qh_1_scaffold_543_8
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5834..6880)
DNA (1047bp) protein (349aa)
hypothetical protein id=24654644 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Uncharacterized protein {ECO:0000313|EMBL:ERG89620.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
qh_1_scaffold_543_9
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6974..8152
DNA (1179bp) protein (393aa)
NMD3 family protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PJ48_9EURY
nonsense mediated mRNA decay-like protein
NMD3 family protein {ECO:0000313|EMBL:ERJ06848.1}; Nonsense mediated mRNA decay-like protein {ECO:0000313|EMBL:CCQ33013.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales
qh_1_scaffold_543_10
unknown

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comp(8196..9416)
DNA (1221bp) protein (407aa)
WD40-like repeat protein
Displaying 10 items

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