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qh_1_scaffold_842

Search features with annotation key words

Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_842_1
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..438)
DNA (438bp) protein (146aa)
30S ribosomal protein S3 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P4C6_HALMD
rps3p; 30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukoha
qh_1_scaffold_842_2
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(438..899)
DNA (462bp) protein (154aa)
50S ribosomal protein L22P n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PKT1_9EURY
50S ribosomal protein L17e (L22p)
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004007}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.
qh_1_scaffold_842_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(902..1324)
DNA (423bp) protein (141aa)
30S ribosomal protein S19P n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIN1_9EURY
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
rps19p; 30S ribosomal protein S19P
qh_1_scaffold_842_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1321..2043)
DNA (723bp) protein (241aa)
50S ribosomal protein L2 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XP59_NATM8
rpl2; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000256|SAAS:SAAS00010821}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;
qh_1_scaffold_842_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2046..2300)
DNA (255bp) protein (85aa)
50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 id=24649899 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
50S ribosomal protein L23P {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
archaeal ribosomal protein L23
qh_1_scaffold_842_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2297..2881)
DNA (585bp) protein (195aa)
50S ribosomal protein L4 n=1 Tax=halophilic archaeon J07HX64 RepID=U1QYC9_9EURY
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
50S ribosomal protein L4
qh_1_scaffold_842_7
unknown

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comp(3118..3840)
DNA (723bp) protein (241aa)

This feature has no annotations

qh_1_scaffold_842_8
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3837..4682)
DNA (846bp) protein (282aa)
Uncharacterized protein rrnAC1612 n=7 Tax=Haloarcula RepID=Y1612_HALMA
nucleic acid methylase
Nucleic acid methylase {ECO:0000313|EMBL:EMA17219.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM 1
qh_1_scaffold_842_9
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4898..5356)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P2W4_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47436.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qh_1_scaffold_842_10
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5361..5600)
DNA (240bp) protein (80aa)
PRC-barrel domain protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQB6_HALUD
PRC-barrel domain protein
PRC-barrel domain protein {ECO:0000313|EMBL:ACV12842.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (st
qh_1_scaffold_842_11
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5651..5884
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1N7_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV49127.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qh_1_scaffold_842_12
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5881..6354
DNA (474bp) protein (158aa)
Heat shock protein 20 n=3 Tax=Haloarcula RepID=M0K4L3_9EURY
heat shock protein 20
Heat shock protein 20 {ECO:0000313|EMBL:EMA15753.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC 33
qh_1_scaffold_842_13
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6501..7088)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9YB62_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY70148.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
hypothetical protein
qh_1_scaffold_842_14
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(7168..7554)
DNA (387bp) protein (129aa)
PilT protein domain protein n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3ST84_NATMM
PilT protein domain-containing protein
PilT protein domain protein {ECO:0000313|EMBL:ADD06951.1}; PilT protein domain-containing protein {ECO:0000313|EMBL:ELY28425.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbale
qh_1_scaffold_842_15
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7551..7796)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WKL7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY48903.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
hypothetical protein
qh_1_scaffold_842_16
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7957..8340)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0K054_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB37734.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
qh_1_scaffold_842_17
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(8330..8554)
DNA (225bp) protein (75aa)
Putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain n=1 Tax=Natronococcus occultus SP4 RepID=L0JZK4_9EURY
putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain
Putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain {ECO:0000313|EMBL:AGB37735.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbale
qh_1_scaffold_842_18
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8652..10064)
DNA (1413bp) protein (471aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=485914 species="Archaea; Euryar
Fumarate hydratase class II n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P091_HALMD
fumC; fumarate hydratase
qh_1_scaffold_842_19
unknown

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10411..10863
DNA (453bp) protein (151aa)

This feature has no annotations

qh_1_scaffold_842_20
unknown

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11863..12267
DNA (405bp) protein (135aa)

This feature has no annotations

qh_1_scaffold_842_21
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12342..12611)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMU4_NATPD
anaerobic dehydrogenase operon protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50562.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qh_1_scaffold_842_22
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12608..13951)
DNA (1344bp) protein (448aa)
fdhC, dmsC; anaerobic dehydrogenase (probable formate dehydrogenase / dimethylsulfoxide reductase) membrane anchor subunit (EC:1.2.1.2 1.8.-.-)
Anaerobic dehydrogenase (Probable formate dehydrogenase / dimethylsulfoxide reductase) membrane anchor subunit n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y4X3_NATM8
Probable anaerobic dehydrogenase membrane anchor subunit {ECO:0000313|EMBL:CCQ37575.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" s
qh_1_scaffold_842_23
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13954..15435)
DNA (1482bp) protein (494aa)
fdhB_1; anaerobic dehydrogenase iron-sulfur binding subunit 1 (EC:1.8.-.- 1.2.1.2)
Anaerobic dehydrogenase (Probable formate dehydrogenase / dimethylsulfoxide reductase) iron-sulfur-binding subunit n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMU2_NATPD
Probable anaerobic dehydrogenase iron-sulfur-binding subunit {ECO:0000313|EMBL:CAI50564.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.
qh_1_scaffold_842_24
unknown

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15897..16067
DNA (171bp) protein (57aa)

This feature has no annotations

Displaying 24 items

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